New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
gson 格式在最新版 enrichKEGG中出错 #685
Comments
Hi, a couple of things: First of all, why do you generate a Related to this, please check the help pages on how to call the The argument gene should be a (character) vector of entrezids. It is also recommended to leave the argument Thus the code below, in which the 7 ids are used that you listed, will do what you intended to do!
|
Thank you for your detailed reply. Sorry for not using English before. clusterProfiler/R/enrichKEGG.R Lines 45 to 58 in 2ab30a9
I added
|
Sorry for my delayed reply! Thanks for highlighting the relevant section in the source code from Indeed, when manually adding it (like you did)
|
As you will see above I opened an issue on the GitHub of the |
我已经下载并安装clusterProfiler,DOSE,HDO.db的github版本
在跑enrichKEGG时候发现报错
返回去查看
按道理来说gson_KEGG创建的gson应该是带有 ENTREZID 的keytype的 (?)
可以请教一下作者原因吗
The text was updated successfully, but these errors were encountered: