Pinned

1. fastKris fastKris Public

   Fast automated protocol generation for crystallisation screens

   Python 1

2. MiningModellingPaePhageAceT MiningModellingPaePhageAceT Public

   Code repository of my MSc of Bioinformatics thesis "An exploratory analysis of the spread and structure of acetyltransferases in Pseudomonas phages"

   Jupyter Notebook

3. sequentialScanner sequentialScanner Public

   A sequential gene scanner for both gene deletions and upregulations, based on flux balance analysis

   MATLAB 1 1

4. Regulatory-Genomics-RNAseqchipSeq Regulatory-Genomics-RNAseqchipSeq Public

   bulk RNAseq of olfactory gene clusters in Drosophila & SMC3-ChIPseq of a neural cell

   Jupyter Notebook

5. Comparative-Genomics-of-Gloeobacter-and-Theobroma Comparative-Genomics-of-Gloeobacter-and-Theobroma Public

   Identifying orthologs, paralogs and co-orthologs using BBH, phylogenetic tree analysis using ClustalW and conservation assessment using a simplified Valdar metric

   Python

6. DL-introduction DL-introduction Public

   Assignments for the introductory course in Deep Learning & Artificial Neural Networks

   MATLAB 1