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Disable metaPhlAn2 table join

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@sminot sminot released this 27 Apr 22:31
· 103 commits to master since this release

The only update for v0.4.0 -> v0.4.1 is that the step to create a single merged table with metaPhlAn2 results has been disabled. The current behavior with --composition is that all of the single-sample metaPhlAn2 results will be published to the output directory, but they will not be included in the output HDF5 table.

This minor release fixes a bug which users may have encountered while using the --composition flag, but which did not arise during automated testing.