🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
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Updated
Mar 15, 2024 - C++
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment
Building classifiers using cancer transcriptomes across 33 different cancer-types
Nanopore sequence read simulator
The START App: R Shiny Transcriptome Analysis Resource Tool
Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data
Technology agnostic long read analysis pipeline for transcriptomes
GET_HOMOLOGUES: a versatile software package for pan-genome analysis
pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
Evolutionary Transcriptomics with R
UNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets
de novo assembly of RNA-seq data using ABySS
Merging, Annotation, Validation, and Illustration of Structural variants
Genome Annotation Without Nightmares
A Python library to visualize and analyze long-read transcriptomes
Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing
Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
This repository contains CWL descriptions of the various tools which will allow you to build workflows for the annotation of transcripts
Software for measuring poly(A) tail length and 3′-end modifications using a high-throughput sequencer
De novo clustering of long transcript reads into genes
FUll-LEngth Transcriptome Analysis
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