Create required reference genome index files for WGS data analysis
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Updated
Aug 3, 2023 - Nextflow
Create required reference genome index files for WGS data analysis
Updated Reference Genome Sequence and Annotation of Mycobacterium bovis AF2122/97
Repository including scripts and workflows for "Investigating the impact of reference assembly choice on genomic analyses in a cattle breed"
Analysis documentation for part of the reference genome assembly of the humble guinea pig. Oxford Nanopore Technologies (ONT) pore-c data.
probability emitting pangenome graphs
Calling SNPs using TASSEL GBS V2 pipeline for ponderosa pine using the reference genome of loblolly pine
Get Started with DNA Sequencing working with .FastQ and .FastA file formats and performing Pattern Matching Algorithms (Exact & Approximate).
R tools to mine & craft somatic mutations from cancer genomes
A Python object for standardized reference genome assets.
🔪⛓️ Repair nanopore assemblies using related genome(s)
Explore eukaryotic genome composition and organization with iLoci
An ultrafast and highly sensitive Next-Generation Sequencing (NGS) read mapper and methylation extractor.
Serves a web interface and RESTful API for reference genome assets.
Numerical Encoding for Human Genetic Variants
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