MATLAB toolbox for ISAAC analysis of resting-state fMRI data
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Updated
Apr 10, 2023 - MATLAB
MATLAB toolbox for ISAAC analysis of resting-state fMRI data
Research School in Clinical Psychiatry at Karolinska Institutet
Code for importing/preprocessing/analysing wavepain MRI and behavioural data. And plotting routines.
This is the course project for CMPUT 652: Machine Learning and Brain grad. course taught at UofAlberta in Fall 2021.
Repository for neurocaps, a Python package to perform Co-Activation Patterns (CAPs) analyses.
Python code for Neuromatch Academy's Summer 2021 Computational Neuroscience final project, exploring the correspondence between Alexnet layers and visual cortex hierarchy using fwRF encoding models and fMRI response prediction.
“Plasma p-Tau181 and GFAP track 7T MR-based changes in Alzheimer’s disease”, Göschel L, 2023
A Python-based Analysis Tool for Molecular fMRI Experiments.
This is a Work In Progress (WIP) project. It is part of my undergraduate studies in Biomedical Engineering at Ostbayerische Technische Hochschule in Germany. This repository incorporates the code and results of my participation in the course Data Science Projects: Train you own Machine Learning Model.
This GitHub repository contains code and data for a assignment investigating the brain's auditory networks using functional Magnetic Resonance Imaging (fMRI).
This repository contains batch scripts to standardise and automate the processing of single echo (SE-fMRI), multi-echo (ME-fMRI) fMRI and VBM data in SPM12.
A tool to facilitate efficient exploration of fMRI/omics data
This is a repository of MATLAB codes accompanying the paper "Non-linear functional co-activations: directed, dynamic, and delayed"
Knights et al. (2021). Does Hemispheric Asymmetry Reduction in Older Adults (HAROLD) in motor cortex reflect compensation? Journal of Neuroscience, (45), 9361-9373.
Pipelines for Multivariate Analyses of Neuroimaging data in Python
A docker image for deep learning in fMRI. GPU supported. Pytorch, Keras, Tensorflow, Nilearn, Pymc3
A GUI app made with python's tkinter for quickly computing fMRI activation maps
fMRI and omics viewer for quality control and data exploration
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