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23 Open 226 Closed
23 Open 226 Closed
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Issues list

Confused about sequence directions in prime editing parameters
#426 opened Apr 24, 2024 by francoiskroll
6
CRISPResso2 cannot handle drop out deletions between two target sites, apparently
#387 opened Mar 7, 2024 by GreenSeaBug
1
Calculating deletion frequency (het/hom)
#382 opened Feb 29, 2024 by olu2016
2
Merge, Split, and Analyze with CRISPResso2
#379 opened Feb 19, 2024 by modifiedplant
3
https is not working
#366 opened Jan 8, 2024 by nephantes
1
--output-bam does not work with docker version
#363 opened Dec 18, 2023 by niko-balanis
1
CRISPRessoPooled with --alternate_alleles
#358 opened Dec 4, 2023 by GreenSeaBug
2
Substitutions and N's outside quantification window counted in alleles frequency table
#356 opened Nov 29, 2023 by GreenSeaBug
8
Support for Oxford Nanopore?
#309 opened Jun 23, 2023 by cdustinr
1
Cannot run Crispresso2 with more then one pegRNA, pegRNA_extension and ngRNA enhancement New feature or request
#232 opened Jul 18, 2022 by JH1606-code
1
CRISPRessoCompare for base editor
#227 opened Jun 27, 2022 by jykr
quantification window ERROR and invalid characters ERROR when using prime-edit
#202 opened Feb 24, 2022 by Masterchiefm
2
match dsODN sequences enhancement New feature or request
#201 opened Feb 17, 2022 by YichaoOU
2
Batch CRISPRessoPooled enhancement New feature or request
#198 opened Feb 11, 2022 by jsacco1
1
Possibility of filtering reads based on phred score of selected basepairs enhancement New feature or request
#179 opened Dec 8, 2021 by caspl1
5
CRISPResso2 Compare interpretation
#139 opened Aug 27, 2021 by JAVI5G
just align (not global alignment) PE reads (without FLASH) to the amplicon sequence and quantify indel rate? enhancement New feature or request
#120 opened Aug 5, 2021 by YichaoOU
7
Show trimmomatic errors/warnings in main console prints enhancement New feature or request
#111 opened Jul 8, 2021 by NikdAK
Include tool in Galaxy WfMS
#92 opened Apr 14, 2021 by ieguinoa
CRISPResso Batch Output - Prime Editing Summary enhancement New feature or request
#89 opened Apr 9, 2021 by mathinic
2
Using flexiguides with CRISPResso2 pooled
#74 opened Jan 28, 2021 by MyriamShafie
2
Alignment strand question
#65 opened Oct 28, 2020 by RebeccaFine
3
'2695 is not in list', u'occurred at index xx'
#31 opened Dec 19, 2019 by staszkj
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