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45 Open 219 Closed
45 Open 219 Closed
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Issues list

Starting Call Set Refinement (CSR) filtering provokes RAM overload
#280 opened May 12, 2024 by amolares
ERROR in reading reference index.
#279 opened Apr 11, 2024 by Knnnk
2
Build fails, is there a singularity?
#278 opened Mar 4, 2024 by ESDeutekom
1
Build failures on gcc-13: option_collation.cpp:1298: error: redundant move in initialization
#276 opened Feb 10, 2024 by trofi
training data & regions of the genome used for somatic random forest model
#275 opened Jan 24, 2024 by omicsnut
Encountered an exception during calling 'std::bad_alloc'
#274 opened Nov 11, 2023 by Ankita-1211
2
Models for NovaseqX?
#273 opened Nov 9, 2023 by cnk113
Position of maternal or paternal haplotypes in Octopus after performing TRIO analyses
#272 opened Nov 6, 2023 by bosamu05
1
Can octopus add a feature to add supported read query names of the variants in the INFO field of the output VCF file?
#271 opened Nov 1, 2023 by yangyxt
1
Will octopus add a mode using paired information to compose a linked debruijn graph?
#270 opened Oct 30, 2023 by yangyxt
Population-level variant calling using accessions with complex ploidy level
#269 opened Oct 26, 2023 by mirror110
Forest file is still not available for donwloading "std::bad_alloc Error"
#268 opened Oct 20, 2023 by hfl112
9
info on UL nanpore reads
#267 opened Sep 18, 2023 by gambalab
2
VCF file is empty
#266 opened Sep 12, 2023 by Axze-rgb
Remove depreciated inheritance of std::unary_function
#264 opened Aug 17, 2023 by GWW
Please let the user decide, if the files are okay .... performance
#260 opened Jun 22, 2023 by HMPNK
@dancooke
1
--refcall POSITIONAL reports * instead of . in ALT column for reference call creating triallelic calls downstream
#257 opened Apr 20, 2023 by Kelzor
GCA_000001405.15_GRCh38_no_alt_analysis_set.fna is not a valid fasta file.
#256 opened Apr 20, 2023 by gitterspec
1
Empty VCF file
#255 opened Apr 17, 2023 by 543090lee
Floating point exception and seg fault in Call Set Refinement with polyclone
#254 opened Apr 13, 2023 by slhogle
Possible typo in the documentation
#253 opened Mar 30, 2023 by gtollefson
failed in compilation
#252 opened Mar 27, 2023 by lmanchon
Question: Is possible to run Octupus with RNA-seq data?
#251 opened Nov 13, 2022 by alejandrogzi
2
Provide optimal parameters for candidate generation
#248 opened Oct 7, 2022 by jdidion
reference calls for re-genotyping individual sample given (-c) sites
#245 opened Sep 24, 2022 by brentp
1
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