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Possible typo in the documentation #253

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gtollefson opened this issue Mar 30, 2023 · 0 comments
Open

Possible typo in the documentation #253

gtollefson opened this issue Mar 30, 2023 · 0 comments

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@gtollefson
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gtollefson commented Mar 30, 2023

Describe the bug
Several command line parameter descriptions in your CLI docs contain a possible typo. --disable-adapter-masking and --disable-overlap-masking both contain descriptions that they are used to apply adapter masking and overlap masking. Since the flags are called "disable" overlap masking I am assuming this are both typos, but I want to be sure before omitting them from our scripts. Our goal is to apply adapter masking and overlap masking while running Octopus and it seems that these are turned on by default.

https://luntergroup.github.io/octopus/docs/cli/#--disable-adapter-masking
https://luntergroup.github.io/octopus/docs/cli/#--disable-overlap-masking

Version

Stable docs

Command
specified above

Command line to run octopus:
NA

Additional context
NA

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