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@JhuangLab

JhuangLab

Biomedical data analysis tools developed in Jinyan Huang Bioinformatics Lab.

Pinned

  1. BioInstaller BioInstaller Public

    A comprehensive R package to construct interactive and reproducible biological data analysis applications based on the R platform

    R 56 13

  2. ngstk ngstk Public

    A toolkit developed by JhuangLab members to facilitate the analysis of next-generation sequencing (NGS) data.

    R 19 5

  3. qap qap Public

    Forked from mingjiewang/qap

    quasispecies analysis package

    Roff

  4. EWASpaper EWASpaper Public

    Leveraging biological and statistical covariates improves the detection power in epigenome-wide association testing

    R 1 1

  5. CytoTree CytoTree Public

    A Toolkit for Construct Tree-shaped Trajectory for Flow and Mass Cytometry data

    R 22 10

Repositories

Showing 10 of 17 repositories
  • BioInstaller Public

    A comprehensive R package to construct interactive and reproducible biological data analysis applications based on the R platform

    R 56 13 12 0 Updated Jan 8, 2023
  • hyperion Public

    A Toolkit for Imaging Mass Cytometry™ (IMC™) with the Hyperion™ Imaging System Data

    R 0 0 0 0 Updated Nov 10, 2022
  • IMCpaper Public

    Scripts for IMCpaper

    R 0 0 0 0 Updated Aug 26, 2022
  • imctoolkits Public

    A Toolkit for Imaging Mass Cytometry™ (IMC™) with the Hyperion™ Imaging System Data

    R 0 0 0 0 Updated Aug 24, 2022
  • CytoTree Public

    A Toolkit for Construct Tree-shaped Trajectory for Flow and Mass Cytometry data

    R 22 10 9 0 Updated Nov 8, 2020
  • CytoTree-dataset Public

    Datasets and code for CytoTree

    HTML 0 GPL-3.0 1 0 0 Updated Oct 31, 2020
  • flowSpy-dataset Public

    Dataset of flowSpy

    HTML 0 GPL-3.0 0 1 0 Updated Jul 9, 2020
  • EWASpaper Public

    Leveraging biological and statistical covariates improves the detection power in epigenome-wide association testing

    R 1 MIT 1 0 0 Updated Feb 29, 2020
  • GSEA-MSigDB Public

    GSEA-MSigDB

    0 0 0 0 Updated Dec 27, 2019
  • configr Public
    R 0 0 0 0 Updated Nov 19, 2019
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