Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集
-
Updated
May 28, 2024 - Python
Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集
Repo for the comradesOO R package. Designed for the analysis of RNA structural data obtained through RNA cross-linking and high-throughput sequencing experiments
Maven project for the bioinformatic application LoopMatcher (aka LASLO).
Code for our Nature Scientific Reports paper "A universal framework for accurate and efficient geometric deep learning of molecular systems"
RiboNucleic Acid (RNA) Language Model
RNA Pseudoknotted Secondary Structure Prediction Using Strict Hierarchical Folding
Visualizes the secondary structure of RNA using Verna
RNA Pseudoknotted Secondary Structure Prediction Using Relaxed Hierarchical Folding
Julia interface to ViennaRNA for RNA structure prediction and analysis
Julia interface to LinearFold RNA structure prediction programs: LinearFold, LinearPartition, LinearSampling, and LinearTurboFold
Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
RNA folding and codon optimization in pure Rust
locality-aware invariant Point Attention-based RNA ScorEr
RNA/DNA/PMO Pseudoknotted Secondary Structure Interaction Prediction Using Relaxed Hierarchical Folding
CONTRAfold-SE - Learning RNA secondary structure (only) from structure probing data
Alignment of RNAs
nucleic acid folding
Curated structures submitted to the RNA-Puzzles experiment. Download as a zip file https://github.com/mmagnus/RNA-Puzzles-submission/archive/master.zip
RNA 3D structure prediction using multiple sequence alignment information docs @ http://EvoClustRNA.rtfd.io
Add a description, image, and links to the rna-structure-prediction topic page so that developers can more easily learn about it.
To associate your repository with the rna-structure-prediction topic, visit your repo's landing page and select "manage topics."