Library for mass spectrometry projects
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Updated
May 23, 2024 - C#
Library for mass spectrometry projects
Base Classes and Functions for Mass Spectrometry and Proteomics
Making volcano plots from proteomic data in IgorPro
My professional repository of project and publication data files in computational biology and data science.
Python pipeline for Absolute Protein Quantification data analysis
A unifying bioinformatics framework for organelle proteomics
ASDParser
Github repository for nanoSPLITS manuscript data and R scripts
Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis
Proteomic Data Manager is a Web-based integrated plateform to combine data storage/backup, process and visualization of MS-based Proteomics data.
Tool to automatically upload result file to Proteomics Data Manager (mainly for MS based proteomics)
MaxQuant and Perseus Bug Reporting
General Java util classes used across different projects
Protein Cluster Quant is a Java software for the analysis of complex proteomics samples (quantitative or not). It helps to reduce the redundancy of the peptide-to-protein relationship and to visualize the results in a bipartite network (Cytoscape).
Java API for the extraction and management of MIAPE documents from standard proteomics data files
RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control analysis of Thermo Orbitrap raw mass spectrometer files from data-dependent acquisition experiments.
Parser for quantitative data from files created by Census software.
Mass spectrometry Perseus Data analysis
Indexing of FASTA files for searching peptide masses and sequences
Using R and Bioconductor packages for the analysis and comprehension of proteomics data.
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To associate your repository with the proteomics-data topic, visit your repo's landing page and select "manage topics."