Interactive Visual Output and Functional Predictions visualisations for Job Dispatcher tool outputs
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Updated
Feb 16, 2023 - TypeScript
Interactive Visual Output and Functional Predictions visualisations for Job Dispatcher tool outputs
Does multiple nucleotidic | aminoacidic BLAST queries in the NCBI BLAST web from a given multiFASTA and writes the output with the results. The queries are parallelized using Threads.
Guia de programas e ferramentas de bioinformática e química computacional
Annotate sequences by BLAST using NCBI taxonomy information
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
NCBI BLAST+ wrapper for WashU MGI cluster
Just a simple program for predicting virus hosts.
A Python3 script to quickly spot check 10 random sequences from a BAM/FASTx file.
Small project to use NCBI and RDP websites for Sequence alignments using Selenium for Python
The official Seqs-Extractor Repository
Blast Query Builder, part of the PhyloclassTalk software for Pharo Smalltalk
This tiny piece of program helps you transferring NCBI Blast result to spreadsheet. You just need to download the Blast result in a single JSON file.
An R package to prepare data for phylogenetic analysis
Python and R Scripts for Statistical analysis of available immunogobulin variable genes
This is a simple implementation of NCBI's BLAST(Basic Local Alignment Search Tool) url API in PHP. Blast finds regions of similarity between biological sequences.
This repository contains the Gene Reader App Codebase
Targeted Probe Design Pipeline. Using mWGS genome bin clusters, prokka annotation predictions, and blast+ databases for generation, processing and filtering probe sequences.
divide blast query and run all chunks across HPC or localhost in parallelly
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