Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)
-
Updated
May 9, 2024 - Python
Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)
An Autonomous Reasoning Agent in the NCATS Biomedical Translator Network that uses EHR and multi-omic cohorts to rank results from user queries
MyChem.info: A BioThings API for chemical/drug annotations
This repo hosts the API metadata for the Translator project
Intelligent APIs for a more connected web: https://smart-api.info
A TRAPI-compliant component of ARAGORN that groups together similar results.
Babel creates cliques of equivalent identifiers across many biomedical vocabularies.
Module to handle TRAPI query and return TRAPI response
Schema and generated objects for biolink data model and upper ontology
Autonomous relay system for NCATS Biomedical Data Translator
A service for finding CURIEs from lexical strings.
Service that produces Translator compliant nodes given a curie
A Translator ARA combining asynchronous database querying, answer coalescence, and answer ranking.
Build system for the RTX-KG2 biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)
MyVariant.info: A BioThings API for human variant annotations
A library for converting TRAPI queries into cypher queries, taking into account the biolink predicate hierarchy
Exposes TRAPI functions to add literature co-occurrence edges, convert publications to edge weights, and provide scores for answers.
Add a description, image, and links to the ncats-translator topic page so that developers can more easily learn about it.
To associate your repository with the ncats-translator topic, visit your repo's landing page and select "manage topics."