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126 Open 63 Closed
126 Open 63 Closed
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Issues list

Generate combined nodes and edges files for KGX export
#272 opened May 2, 2024 by gaurav
EFO:0010702 should be combined with UMLS:C4324621 via MedDRA:10079385
#270 opened May 2, 2024 by gaurav Babel for LitCoin v1.0
1
EFO:0009458 being typed as a PhenotypicFeature even though it is a measurement
#269 opened May 2, 2024 by gaurav Issues needing investigation
1
Consider whether we can improve merging of UMLS terms that end up in the leftover UMLS file
#267 opened Apr 25, 2024 by gaurav Babel for LitCoin v1.0
Special case * Use Disorders ?
#265 opened Apr 15, 2024 by cbizon Babel for LitCoin v1.0
1
Remove special handling of Polypeptide and ChemicalEntity prefixes
#263 opened Apr 15, 2024 by gaurav
1
Levothyroxine not being properly conflated via drug-chemical conflation
#262 opened Apr 12, 2024 by gaurav
Current NodeNorm Exp with drug conflation conflates all COVID-19 vaccines into a single clique drug chemical conflation
#261 opened Apr 11, 2024 by gaurav
InterPro database CURIEs are not normalizing
#260 opened Apr 9, 2024 by beasleyjonm
How to handle obsolete GO terms (or obsolote terms in general)
#259 opened Apr 9, 2024 by beasleyjonm
UMLS-only synonyms file is missing clique_identifier_count
#258 opened Apr 8, 2024 by gaurav Babel January 2024
@gaurav
UMLS Semantic Type T045 ("Genetic Function") is not mapped to a Biolink Class
#257 opened Apr 8, 2024 by gaurav
liver regeneration factor 1 being cliqued into potassium cation (CHEBI:29103)
#256 opened Apr 5, 2024 by gaurav
What should the type for "Dopamine secreting" be? ( NCIT:C103871 )
#255 opened Apr 4, 2024 by cbizon
Add PathWhiz identifiers to Babel new data source A new data source to include in Babel
#254 opened Mar 29, 2024 by gaurav Not urgent
Oxidane should be recognized as a synonym of water
#252 opened Mar 22, 2024 by gaurav
Regex needs to be corrected
#251 opened Mar 22, 2024 by gaurav
MONDO:0005799 (hookworm infectious disease) has no equivalent IDs?
#249 opened Mar 18, 2024 by colleenXu
Why does PUBCHEM.COMPOUND:3559 have a label of HALOPERIDOL LACTATE instead of Haloperidol?
#244 opened Mar 8, 2024 by gaurav
1
Note or remove obsolete/deprecated terms from MONDO and HP
#243 opened Mar 7, 2024 by gaurav
PUBCHEM.COMPOUND:15625 missing in 2024jan5
#242 opened Mar 5, 2024 by gaurav Babel January 2024
Why do we have obsolete/deprecated MONDO terms?
#241 opened Feb 22, 2024 by gaurav
Add the Mammalian Phenotype Ontology new data source A new data source to include in Babel
#240 opened Feb 20, 2024 by gaurav
Toxic waste and toxic industrial waste are not small molecules Data Source: UMLS and RxNorm
#239 opened Feb 16, 2024 by gaurav
1
Consider whether to incorporate normalizedSubClassInformationContent from Ubergraph
#238 opened Feb 12, 2024 by gaurav
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