multiqc
Here are 42 public repositories matching this topic...
MultiQC plugin for the National Genomics Infrastructure in Stockholm, Sweden.
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Aug 4, 2023 - Python
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Oct 20, 2022 - Jupyter Notebook
Walks through installation and usage of FASTQC, MultiQC, Trimmomatic, and Salmon for transcriptomic data preprocessing. Includes Grid Engine shell scripts that can be looped over many files in a directory.
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Feb 9, 2024 - R
A Snakemake workflow for quality control assessment of Illumina NGS data using FastQC and MultiQC
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Apr 3, 2023 - Python
Build Docker container for MultiQC and (optionally) convert to Apptainer/Singularity.
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Feb 28, 2023 - Dockerfile
The repository contain directories of projects done during the bioinformatics degree program
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Nov 25, 2022 - HTML
Docker to run multiqc for combining bioinformatic log reports
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Mar 15, 2018
Classification of RNA-Seq samples using circRNA expression
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Sep 19, 2018 - HTML
Snakemake workflow for Salmon quantification and FastQC quality controls
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Mar 20, 2021 - Python
Align reads over a reference genome, filter aligned-reads, and mark duplicates
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Apr 24, 2024 - Python
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