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imzml

Here are 5 public repositories matching this topic...

AlanRace / imzMLConverter

Tool for converting mass spectrometry data to the imzML format.

converter imzml mass-spectrometry-imaging converting-data

Updated Jan 21, 2022
Java

novak-jiri / cyclobranch

A tool for mass spectrometry data analysis.

bioinformatics metabolomics mass-spectrometry lc-ms ms-data imaging peptide-identification peptides mzml image-fusion desi-msi imzml de-novo dereplication mass-spectrometry-imaging bioinformatics-tool maldi-msi

Updated Aug 21, 2023
C++

mjoppich / pIMZ

This framework allows to perform scRNA-seq-like analyses of imaging mass-spectrometry data. Check out the example jupyter-notebook in examples/

mass-spectrometry msi ims imzml mass-spectrometry-imaging

Updated Apr 26, 2024
Jupyter Notebook

AlanRace / jimzMLParser

Java imzML (mass spectrometry imaging) and mzML (mass spectrometry) parser

java spectrometry imaging mzml mass imzml

Updated Jan 21, 2022
Java

LlucSF / Raman2imzML

R package to convert raman data in .txt format exported from WiRe 5.2(Renishaw) and FIVE 5.1(WiTec) into the imzML data format.

raman imzml raman-spectroscopy imzml-format imzml-parser renishaw witec raman-imzml

Updated Sep 1, 2020
C++

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