gwas
Here are 373 public repositories matching this topic...
A Python implementation of the "Controlling the False Discovery Rate via Knockoffs" paper from 2015, designed to provide tools for generating knockoff features and applying controlled variable selection techniques in high-dimensional data settings.
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May 12, 2024 - Jupyter Notebook
TwosampleMR and MultivariableMR perform with simple commands without prior knowledge or having to go through lengthy boring protocols
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May 12, 2024 - R
Efficient Permutation-based GWAS for Normal and Skewed Phenotypic Distributions
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May 10, 2024 - Python
PolyFun (POLYgenic FUNctionally-informed fine-mapping)
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May 10, 2024 - Python
Efficient variant-call data storage and retrieval library using the TileDB storage library.
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May 12, 2024 - C++
The CGR GWAS QC processing workflow.
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May 9, 2024 - Python
GORpipe is a tool based on a genomic ordered relational architecture and allows analysis of large sets of genomic and phenotypic tabular data using declarative query language, in a parallel execution engine.
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May 8, 2024 - Java
Open Targets python framework for post-GWAS analysis
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May 8, 2024 - Jupyter Notebook
tooling for semantic search of NHGRI GWAS catalog
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May 7, 2024 - R
API for MRC-IEU OpenGWAS platform (https://gwas.mrcieu.ac.uk)
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May 6, 2024 - Python
Package for analyzing GWAS summary statistics data
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May 12, 2024 - Julia
Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data
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May 3, 2024 - R
Convert GWAS sumstat files into a common format with a common reference for positions, rsids and effect alleles.
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May 2, 2024 - Shell
Rapid standardisation and quality control of GWAS or QTL summary statistics
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May 2, 2024 - R
This is a repository to show my experience analyzing different kinds of Omics data.
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May 1, 2024 - JavaScript
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