Companion repository to the article: "Comparative whole-genome approach to identify bacterial traits for microbial interactions"
-
Updated
Mar 16, 2022 - R
Companion repository to the article: "Comparative whole-genome approach to identify bacterial traits for microbial interactions"
A containerized nextflow pipeline designed to annotate prokaryote genomes.
Empirical intron annotation for Loxodes magnus genome assembly
Scripts I wrote as a graduate research assistant while working on the Wyeomyia smithii Genome project for Dr. Elizabeth Cooper's Lab at UNC Charlotte
Viral genome assemble and characterisation
genome annotation length calculations.
tair id to pubmed links for articls, genes, annotations, locus tag.
Linked Data Platform for Animal Breeding & Genomics
Backup an apollo instance to a git repository
Aphrocallistes vastus genome
A comparative annotation toolkit (CAT) pipeline for 304 fly genomes.
BLAST DataBase Manager
Ergatis is a web-based utility that is used to create, run, and monitor reusable computational analysis pipelines; I was a developer on this project at The Institute for Genomic Research/J. Craig Venter Institute from 2005 to 2008.
De novo assembly of the red legged patridge (Alectoris rufa) genome
Python implementation of barrnap (Bacterial ribosomal RNA predictor)
The genome of the contractile demosponge Tethya wilhelma
Arche: a functional-optimized annotator for microbial meta(genomes)
Add a description, image, and links to the genome-annotation topic page so that developers can more easily learn about it.
To associate your repository with the genome-annotation topic, visit your repo's landing page and select "manage topics."