RNN-based Codon Optimization Tool. Publication: https://doi.org/10.1186/s12859-023-05246-8

A python project for analysis of codon usage for gene or genome analysis

Multi-bAse Codon-Associated variant Re-annotatiON (MACARON)

🧬🦠🧪 [research][wip] Library for working with DNA, RNA, and etc acids

Interspecies protein translator + translation optimizer

The codon project was created to increase code sharing, code consistency, coding standards, and encourage collaboration. Package documentation is available on the GitHub pages. codonPython aims to reduce the barrier for entry for analysis and provide software development experience for those at a higher level of technical ability.

Parallel demonstrations for counting and printing prime numbers

Analysis of codon positional dependency

Protein to RNA reverse translation

A little independent Python algorithm capable of finding Open Reading Frames in any genomic sequence.

A script for codon harmonization.

Generates a codon-based alignment from an amino acid alignment and CDS sequences

Implementation of the "Ray Tracing in One Weekend" books using Codon

overcomplicated biology project spaghetti code written at 3 am ¯\_(ツ)_/¯

Here you can find basically most of the exercises I'm solving during my University journey. This repo will contain lots of folders inside of it, each of one related to one subject. It won't be limited to one language.

A Simple Stop Codon Reassignment Detector in Silico

Codon decoder, taking a input from user, then the program will display the type protein created by the codon

Translate peptide sequences into genes using the nucleus genetic code and E. coli codon frequencies.

StretchFinder is a tool that helps to analyze the codon composition in genomes. It has the basic pipelines needed in order to draw preliminary conclusions about the codon usage and composition of genomes.

Utility to generate codon mutations of a given coding DNA sequence