Discovering cis-regulatory motifs in proximal promoters of plants in RSAT::Plants
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Updated
May 17, 2024 - HTML
Discovering cis-regulatory motifs in proximal promoters of plants in RSAT::Plants
Functional Associations using Variational Autoencoders
LEGEND: An integrative algorithm for identifying co-expressed and cofunctional genes in multimodal transcriptomic sequencing data
Masters' thesis: Construction & analysis of miRNA-RAB sub-networks in human RAB associated disorders- A network biology approach
CoExp website is a web-based tool developed in .NET Core Framework, for querying 109 independent gene co-expression networks from the family of CoExp R packages.
Cancer-dedicated gene set interpretation
Gene Co-expression Network analysis pipeline
Object Icon, beginning from a migration to Git of the Subversion at https://sourceforge.net/p/objecticon/code/ For the original, use branch objecticon-last-svn-commit
SCANet is a python package that incorporates the inference of gene co-expression networks from single-cell gene expression data
Code accompanying the manuscript "Brain gene co-expression networks link complement signaling with convergent synaptic pathology in schizophrenia"
SALMON: Survival Analysis Learning with Multi-Omics Neural Networks
Repository for all R scripts and results associated with my research dissertation for the MSc Bioinformatics and Computational Biology degree in University College Cork, 2022.
Inferring gene co-expression networks from single cell gene expression data
Visualization of co-expression networks
Data repository of the manuscript: Transcriptomic profiling of castes and of sexually and parthenogenetically produced reproductive females in the termite Cavitermes tuberosus
Causal inference, differential expression, and co-expression for scRNA-seq
Conserved and Comparative Co-expression across Diverse Species
An R software for Gene Co-Expression Analysis
Gene co-expression network analysis
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