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  • Centre for Biodiversity Genomics @ Biodiversity Institute of Ontario, University of Guelph
  • Toronto, Canada
  • Mastodon @DNAdataPhile@ecoevo.social

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Achievement: StarstruckAchievement: Pull SharkAchievement: Arctic Code Vault Contributor
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Pinned

  1. MetaWorks MetaWorks Public

    MetaWorks is a flexible multi-marker metabarcode pipeline for processing paired-end Illumina reads from raw fastq.gz files to taxonomic assignments.

    17 4

  2. CO1Classifier CO1Classifier Public

    This repository contains CO1 reference sets that can be used with the RDP Classifier, BLAST, or SINTAX to classify COI metabarcode sequences.

    29 4

  3. 18SClassifier 18SClassifier Public

    This repository contains 18S reference sets that can be used with the RDP Classifier to classify 18S rDNA metabarcode sequences.

    Perl 3

  4. rbcLClassifier rbcLClassifier Public

    This repository contains rbcL reference sets that can be used with the RDP Classifier to classify rbcL metabarcode sequences.

    1

  5. 12SfishClassifier 12SfishClassifier Public

    This repository contains 12S mitochondrial gene reference sets that can be used with the RDP Classifier to classify 12S metabarcode sequences from fish.

    5 1

  6. UNITE_ITSClassifier UNITE_ITSClassifier Public

    Fungal UNITE ITS reference set formatted for the Ribosomal Database Project (RDP) classifier.

    Perl 1 1