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@single-cell-genetics

single-cell-genetics

Popular repositories

  1. cellsnp-lite cellsnp-lite Public

    Efficient genotyping bi-allelic SNPs on single cells

    C 118 11

  2. cellSNP cellSNP Public

    Pileup biallelic SNPs from single-cell and bulk RNA-seq data

    Python 71 10

  3. vireo vireo Public

    Demultiplexing pooled scRNA-seq data with or without genotype reference

    Python 66 23

  4. cardelino cardelino Public

    Clone identification from single-cell data

    R 57 12

  5. singlecell_neuroseq_paper singlecell_neuroseq_paper Public template

    Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation

    Jupyter Notebook 18 6

  6. XClone XClone Public

    Detection of allele-specific subclonal copy number variations from single-cell transcriptomic data.

    Python 18 2

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