v1.0.11

Ignoring .eggs directory

v1.0.10

Triggered to sync up latest version with conda

New docker release

• Fix failing travis and docker hub build

Update external dependency version checking

Merge pull request #79 from andrewjpage/prog_versions

Prog versions

Version 1.0.8

bug fix: iva_qc crashes on a reference genome with no CDS. Fix added to stop iva_qc_make_db from including anthing without at least one CDS.

Version 1.0.7

Require Pysam version to be at least 0.8.1 (previously also had to be <=0.8.3 because of pyasm build issues).

Version 1.0.6

Two little changes, which won't affect results.

1. Highlight the --reference option as experimental.
2. added Travis CI.

Version 1.0.5

Add support for new samtools sort syntax introduced in 1.2. Keep support for old samtools versions as well.

Version 1.0.4

• force to use pysam 0.8.1-0.8.3. The new 0.9.0 will not install.

Version 1.0.3

Now runs kmc in multi-threaded mode by default. To force kmc to use one thread, use the new option --kmc_onethread.