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55 Open 220 Closed
55 Open 220 Closed
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Issues list

PESCAn Error: cannot allocate vector of size 150.9 Gb
#354 opened Apr 17, 2024 by YuZhang337
4
Example in Tutorial page 42 or PE-SCAn perspective plot could not be reproduced due to error "mfrow" has the wrong length
#352 opened Apr 10, 2024 by usernicai
Errors with chromosome_matrix() and load_contacts() function~
#351 opened Apr 9, 2024 by Datacond
2
calculating insulation score get inconsistant results
#350 opened Mar 25, 2024 by jiangshan529
5
HiCExplorer final mcool file load in GENOVA
#346 opened Mar 11, 2024 by usernicai
1
ARA and pyramid plots issues
#344 opened Feb 20, 2024 by BERICP01
1
Memory footprint in Rstudio
#343 opened Jan 26, 2024 by LucasMcNU
6
centromeres setting
#342 opened Jan 18, 2024 by tan5251
1
how to create CS_discovery objsect from extrenal compartment results?
#341 opened Jan 18, 2024 by tan5251
3
Disruption after load files
#339 opened Oct 24, 2023 by ccmeth
8
Question: Plot relative contact frequencies stratified by distance for a limited region?
#338 opened Oct 19, 2023 by kalavattam
When I used loops obtained at a 50Kb resolution and a 50Kb matrices to create the APA plot, I obtained abnormal results.
#337 opened Oct 17, 2023 by Chuan0518
2
hic file load error
#336 opened Oct 8, 2023 by Chuan0518
2
Importing data from .hic and pyramid plot
#335 opened Aug 1, 2023 by ionas23
2
APA results only contains a minimum part of original loops
#331 opened Jul 9, 2023 by Devalock
3
list of loops in hic_matrixplot
#329 opened Jun 5, 2023 by Guanchen-Li
3
About calling compartment PC1 values
#327 opened May 8, 2023 by GleeenSIBS
1
Issues related to "chip" in function "hic_matrixplot"
#326 opened May 5, 2023 by ccmeth
Why are RCP plots not starting at the same Y-axis?
#325 opened May 2, 2023 by Elphege-Nora
Problem when reading in the second .hic file
#324 opened Apr 30, 2023 by ReinhardUllmann
5
Concern related to function "intra_inter_TAD"
#323 opened Mar 23, 2023 by ccmeth
3
C-scan error
#322 opened Mar 20, 2023 by ianikim
2
PEScan CTCF plot from the paper
#321 opened Mar 15, 2023 by odovgusha
3
compartment_score
#319 opened Feb 21, 2023 by knight-hzj
4
how to write insulation score s3 format to bedgraph format
#318 opened Jan 6, 2023 by jiangshan529
4
ProTip! Exclude everything labeled bug with -label:bug.