MuSiCal v1.0.0

What's Changed

• Bug fix related to input of DenovoSig by @Hu-JIN in #59
• Bug fix; Missing connected signatures by @BeGeiger in #63
• Bug fixes remove_samples_based_on_gini by @BeGeiger in #64
• Fixed indentation by @BeGeiger in #65
• Turned tabs into spaces by @BeGeiger in #66
• Update preprocessing.py to change a default value by @Hu-JIN in #68

New Contributors

• @BeGeiger made their first contribution in #63

Full Changelog: v1.0.0-beta...v1.0.0

MuSiCal v1.0.0-beta

What's Changed

• Initial commit by @Hu-JIN in #1
• Dev by @Hu-JIN in #2
• Dev by @Hu-JIN in #3
• Update readme by @Hu-JIN in #4
• DenovoSig by @Hu-JIN in #5
• Small bug fix by @Hu-JIN in #6
• Set max_n_components to be at most n_samples by @Hu-JIN in #8
• Small bug fix by @Hu-JIN in #9
• Small bug fix by @Hu-JIN in #10
• Dev by @Hu-JIN in #11
• add refitting with sparsity and reassign in Denovo class by @dgulhan-bio in #13
• Validation for denovo and refitting calculations by @dgulhan-bio in #17
• Dev by @Hu-JIN in #22
• Dev by @Hu-JIN in #26
• Update README.md by @Hu-JIN in #27
• Dev by @Hu-JIN in #28
• dev by @Hu-JIN in #29
• Relatively stable version of MuSiCal by @Hu-JIN in #41
• Major improvements by @Hu-JIN in #42
• Dev by @Hu-JIN in #43
• Catalog handling, validation, cleaning by @dgulhan-bio in #44
• fix init for cleaned up files by @dgulhan-bio in #45
• Clean up obsolete codes, add examples, and update readme. by @Hu-JIN in #46
• Dev by @Hu-JIN in #47
• Dev by @Hu-JIN in #48
• Dev by @Hu-JIN in #49
• Dev by @Hu-JIN in #50
• Update example_validation_internal.ipynb by @Hu-JIN in #51
• Dev by @Hu-JIN in #52
• Dev by @Hu-JIN in #53
• Remove obsolete codes by @Hu-JIN in #54
• Dev by @Hu-JIN in #55
• Dev by @Hu-JIN in #56
• Update setup.py by @Hu-JIN in #57
• Update setup.py by @Hu-JIN in #58

New Contributors

• @Hu-JIN made their first contribution in #1
• @dgulhan-bio made their first contribution in #13

Full Changelog: https://github.com/parklab/MuSiCal/commits/v1.0.0-beta