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Version bump
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nvictus committed Apr 27, 2017
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29 changes: 29 additions & 0 deletions CHANGES.md
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### 0.7.0 (2017-04-27) ###

New features

* New Cooler URIs: Full support for Cooler objects anywhere in the data hierarchy of a .cool file
* Experimental dask support via `cooler.contrib.dask`
* New explicit bin blacklist option for `cooler balance`
* Various new CLI tools:
* `cooler list`
* `cooler copy`
* `cooler merge`
* `cooler csort` now produces Pairix files by default
* `cooler load` now accepts two types of matrix text input formats
* 3-column sparse matrix
* 7-column bg2.gz (2D bedGraph) indexed with Pairix (e.g. using csort)
* `cooler coarsegrain` renamed `cooler coarsen`
* Multi-resolution HiGlass input files can now be generated with the `cooler zoomify` command
* More flexible API functions to create and append columns to Coolers in `cooler.io`

Backwards-incompatible changes

* `cooler.io.create` signature changed; `chromsizes` argument is deprecated.
* `cooler csort` argument order changed

Bug fixes

* Chromosome name length restriction removed
* `Cooler.open` function now correctly opens the specific root group of the Cooler and behaves like a proper context manager in all cases

### 0.6.6 (2017-03-21) ###

* Chromosome names longer than 32 chars are forbidden for now
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2 changes: 1 addition & 1 deletion cooler/__init__.py
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"""
import logging
__version__ = '0.6.7-dev'
__version__ = '0.7.0'
__format_version__ = 2
_logger = None

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