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Make annotate faster by using indexing instead of merge #127

Make annotate faster by using indexing instead of merge

Make annotate faster by using indexing instead of merge #127

Workflow file for this run

name: CI
on:
push:
branches: [ master ]
tags:
- "v*" # Tag events matching v*, i.e. v1.0, v20.15.10
pull_request:
branches: [ master ]
jobs:
Lint:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Set up Python
uses: actions/setup-python@v4
with:
python-version: "3.x"
- run: |
python -m pip install --upgrade hatch
pip install -e .[dev]
hatch run lint
Test:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: [ "3.8", "3.9", "3.10", "3.11" ]
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- run: |
python -m pip install --upgrade pip
pip install -e .[dev]
# stop the build if there are Python syntax errors or undefined names
ruff . --select=E9,F63,F7,F82
pytest
Release:
# Only run on v* tag events
if: startsWith(github.ref, 'refs/tags')
needs: [Lint, Test]
uses: open2c/cooler/.github/workflows/publish.yml@master