Source Code for the ManyEcoEvo Manuscipt

This repository contains the source code for generating the ManyEcoEvo Manuscript “Same data, different analysts: variation in effect sizes due to analytical decisions in ecology and evolutionary biology.”¹

The data primary analysis code and pipeline is stored and executed in the R package ManyEcoEvo::, located at https://doi.org/10.5281/zenodo.10046153 or https://github.com/egouldo/ManyEcoEvo.

Reproducing the manuscript on your machine

1. Clone or download and unzip this repository
2. Open the ManyAnalysts.Rproj file in RStudio
3. Install renv:: and Run renv::restore() to load the packages used in this repository locally on your machine (see renv:: for details). Follow the prompts, and if ManyEcoEvo:: does not install, install it with: `devtools::install_github(“egouldo/ManyEcoEvo”).
4. In the console, run quarto::quarto_render(), output will be created in _book/index.html.

License

The code in this repository is licensed with the GNU GPL 3 license.

Contributing

Should you find any mistakes or errors, please lodge a GitHub issue at https://github.com/egouldo/ManyAnalysts/issues. This repository is released with a Contributor Code of Conduct .

Footnotes

1. Gould, E., Fraser, H., Parker, T. et al. (2023). Same data, different analysts: Variation in effect sizes due to analytical decisions in ecology and evolutionary biology [Preprint]. Ecology and Evolutionary Biology. https://doi.org/10.32942/X2GG62 ↩