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OrthoFinder v2.5.4
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@davidemms davidemms released this 08 Jul 10:06
· 31 commits to master since this release
2.5.4
1b3f37c

New in this release

  • Add tool create_files_for_hogs.py for creating sequence fasta files for HOGs
  • Extend primary_transcripts.py script to interpret NCBI files
  • Reduce RAM usage when trimming for very large alignments
  • Resolve #526: Handle multiprocessing error occurring only in old versions of glibc
  • Resolve #557: Progress reports were sometimes reported out of order
  • Resolve #567: Check that the requested number of threads is positive
  • Resolve #570: Use fork instead of spawn on Mac
  • Resolve #580: Fix to allow primary transcripts script to work for NCBI isoforms labelled with letters
  • Resolve #586: Use tempfile library to handle tmp folders
  • Fix a problem with overwriting MSA files
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