pango designation v1.21

Release notes

fe4cc44 - Cornelius Roemer, 2023-05-18 21:55:50 +0200 : Update README.md: recommend partial clone to save 15GB
777d3b8 - InfrPopGen, 2023-05-22 14:08:54 +0100 : Added new lineage XBB.1.5.70 from #1982 with 5 new sequence designations, and 0 updated
79816d8 - InfrPopGen, 2023-05-22 14:10:27 +0100 : Merge pull request #2007 from InfrPopGen/master
4803957 - Cornelius Roemer, 2023-05-23 17:17:11 +0200 : Designate FL.4.1 (S:N450I) with 80 sequences
edd71a5 - Cornelius Roemer, 2023-05-23 17:21:00 +0200 : Designate FL.4.2 (ORF1a:T951I, China) with 20 sequences
ee9b439 - Cornelius Roemer, 2023-05-23 17:26:11 +0200 : Add FL.1.4 (S:478R, S:Q1208H, Vietnam, from issue #1985) with 30 seqs
783e229 - Cornelius Roemer, 2023-05-23 17:29:05 +0200 : Designate FL.13 (G4354A) with 1k seqs
bc1a317 - Cornelius Roemer, 2023-05-23 17:31:00 +0200 : Add FL.13.1 (S:A411S, ORF1a:P80S, China, from #1996) with 100 seqs
b7f3d28 - Cornelius Roemer, 2023-05-23 17:35:41 +0200 : Add FL.14 (S:V1122M, C29311T, C22978T, Russia/Finland) with 100 seqs
ac884a4 - Cornelius Roemer, 2023-05-23 17:37:44 +0200 : Add extra GB.1 designations
b30181a - Cornelius Roemer, 2023-05-23 17:41:11 +0200 : Designate GF.1 (XBB.1.5.24.1 with S:E748V, C19524T) with 250 seqs
f8846db - Cornelius Roemer, 2023-05-23 17:45:56 +0200 : Designate GG.1 (XBB.1.5.38.1, S:478R, Europe) with 40 seqs
79c55b3 - Cornelius Roemer, 2023-05-24 11:29:18 +0200 : Add FK.1.3 (ORF1b:M1839I, on C27804T>ORF1b:L2580I>N:G34E branch, Australia) with 100 seqs
30c8269 - Cornelius Roemer, 2023-05-24 11:31:09 +0200 : Add extra FK.1.1 designations that are wrong on the Usher tree
4349543 - Cornelius Roemer, 2023-05-24 11:34:07 +0200 : Add FK.1.4 (S:S704L, on C27804>ORF7a:Y40H branch, Australia) with 60 seqs
1e2e43b - Cornelius Roemer, 2023-05-24 11:36:58 +0200 : Add FK.1.2.1 (ORF1a:T891I, Germany/Denmark/Finland/Austria) with 170 seqs
1321897 - Cornelius Roemer, 2023-05-24 11:51:24 +0200 : Add FY.1.1 (S:A83S, Malaysia/Japan) with 100 seqs
0e8bf36 - Cornelius Roemer, 2023-05-24 11:53:21 +0200 : Add FY.3.1 (S:I210T, China) with 50 seqs
90a5a41 - Cornelius Roemer, 2023-05-24 11:57:08 +0200 : Add lineage XBB.1.41 (S:L335S, S:R403K, S:486P, possibly common in Central/West Africa, from #1997) with 15 seqs
ba1ad48 - Cornelius Roemer, 2023-05-24 11:59:11 +0200 : Add EG.5.2 (N:L161F) with 130 seqs
399b473 - Cornelius Roemer, 2023-05-24 12:00:43 +0200 : Add FY.4.1 (S:S494P, Kenya) with 20 seqs
c5bd894 - Cornelius Roemer, 2023-05-24 12:28:41 +0200 : Fix lineage_notes.txt
893c42c - Cornelius Roemer, 2023-05-25 17:24:33 +0200 : Add XBB.1.5.71 (S:V511I, Spain) with 80 designations
9056350 - Cornelius Roemer, 2023-05-25 17:29:44 +0200 : Add XBB.1.16.7 (S:T732I after T12214C, Singapore/Japan/SouthKorea) with 90 designations
0cb8903 - Cornelius Roemer, 2023-05-26 11:07:14 +0200 : Add XBB.1.16.8 (S:T732I after C28531T, India/USA/China/Australia) with 100 seqs
cd66713 - InfrPopGen, 2023-05-27 11:37:05 +0100 : Fixed typo introduced to lineage_notes.txt entry for FR.1
d7e4664 - InfrPopGen, 2023-05-27 11:38:41 +0100 : Merge pull request #2022 from InfrPopGen/master
981bab4 - InfrPopGen, 2023-05-29 12:53:13 +0100 : Added new lineage FL.15 from #1994 with 53 new sequence designations, and 0 updated designations
bda46e2 - InfrPopGen, 2023-05-29 12:54:52 +0100 : Merge pull request #2026 from InfrPopGen/master
c36901d - Cornelius Roemer, 2023-05-30 10:17:47 +0200 : Designate EG.6 (XBB.1.9.2 with C1684T, Israel) with 250 seqs
d0acddd - Cornelius Roemer, 2023-05-30 10:19:06 +0200 : Designate EG.6.1 (S:456L, Israel/Japan/Canada) with 70 seqs
d0696fb - Cornelius Roemer, 2023-05-30 11:44:42 +0200 : Designate FP.2 (XBB.1.11.1 with S:F186S, ORF1a:V3078I, Indonesia/Malaysia/Singapore) with 70 seqs
b5e3461 - Cornelius Roemer, 2023-05-30 11:46:16 +0200 : Designate FP.3 (XBB.1.11.1.3, S:478R, Indonesia/Malaysia) with 40 seqs
8a1522f - Cornelius Roemer, 2023-05-30 11:49:40 +0200 : Designate FP.4 (XBB.1.11.1.4, C3241T, C2536T, Vietnam/South Korea/Japan) with 150 seqs
4c3870b - Cornelius Roemer, 2023-05-30 11:51:03 +0200 : Designate FP.2.1 (S:478R, ORF1a:I693T, ORF1a:T951A, ORF3a:W149C, Indonesia) with 35 seqs
e6e3ffb - Cornelius Roemer, 2023-05-30 19:33:03 +0200 : Designate XBB.1.16.9 (S:F456L (T22930G), ORF1a:S2500F, Canada/Sweden/SouthKorea/USA) with 10 seqs
ecb7f8c - Cornelius Roemer, 2023-05-30 19:46:24 +0200 : Designate CM.7.1 (S:K147E, Europe) with 20 seqs
300f836 - Cornelius Roemer, 2023-05-30 19:49:09 +0200 : Designate XBB.2.10 (S:Q52H, Latvia/Poland) with 100 seqs
c9a4315 - Cornelius Roemer, 2023-05-30 19:59:37 +0200 : Designate FL.16 (S:478R, ORF1a:P1018T, Indonesia) with 30 seqs
27fc997 - Cornelius Roemer, 2023-05-30 20:07:27 +0200 : Specify nuc mutations for S:F456L in lineage notes (there are 3 options)
ec4edbb - Cornelius Roemer, 2023-05-30 20:10:40 +0200 : Add 456L nuc mutation for EG.6.1 to lineage notes
e2592d6 - Cornelius Roemer, 2023-05-30 21:19:07 +0200 : Redesignate FL.16 as XBB.1.9.7 as it does not have XBB.1.9.1 defining 11956C
b855126 - Cornelius Roemer, 2023-05-31 00:26:50 +0200 : Designate XBB.1.5.72 (S:F456L (T22928C), ORF1a:G445S, T9823C, T10204C, South America) with 30 seqs
b77684a - Cornelius Roemer, 2023-05-31 12:25:08 +0200 : Designate FR.1.1 (S:P82H, ORF1a:L293F, China) with 80 seqs
5bf2295 - Cornelius Roemer, 2023-05-31 12:28:36 +0200 : Designate FR.1.2 (S:R190M, China) with 15 seqs
23a9cbc - Cornelius Roemer, 2023-05-31 12:54:34 +0200 : Designate XBB.1.42 (S:486P, S:Q613H, on ORF1a:T4175I branch with XBB.1.9, Indonesia/Malaysia/China) with 180 seqs
ef3c041 - Cornelius Roemer, 2023-05-31 15:22:43 +0200 : Designate XBB.1.43 (G11071A, Indonesia, from #2015) with 200 seqs
1f78bf8 - Cornelius Roemer, 2023-05-31 15:25:08 +0200 : Designate XBB.1.43.1 (S:486P, ORF1a:A2621V, A20713C, from #2015) with 160 seqs
12f93ab - Cornelius Roemer, 2023-06-01 17:51:20 +0200 : Designate XBB.2.6.1 (S:P521S, Peru, from #1869) with 290 seqs
ec9cb23 - Cornelius Roemer, 2023-06-01 17:58:06 +0200 : Designate GH.1 (XBB.2.6.1 with ORF9b:P51Q, T6895C, T9148C, A15192C, Peru, from #1869) with 230 seqs
05291d7 - Cornelius Roemer, 2023-06-01 18:05:58 +0200 : Designate XBB.2.6.2 (S:T19L, Peru) with 160 seqs
4164f55 - Cornelius Roemer, 2023-06-01 18:16:56 +0200 : Designate XBB.2.3.12 (S:S494P, from #2029) with 60 seqs
a3e16cb - Cornelius Roemer, 2023-06-01 18:27:52 +0200 : Designate XBB.1.5.73 (T28271C, USA/Peru) with 600 seqs
b123380 - Cornelius Roemer, 2023-06-01 18:34:31 +0200 : Designate FD.2.1 (XBB.1.5.15.2.1, ORF1a:D3022N, Peru) with 30 seqs
218f387 - Cornelius Roemer, 2023-06-01 18:39:37 +0200 : Designate XBB.1.5.74 (S:K462R, ORF1b:V728I, Peru, from #1998) with 40 seqs
16473ab - Cornelius Roemer, 2023-06-01 18:47:47 +0200 : Designate XBB.1.5.75 (C3695T, Peru/France) with 450 seqs
e4a9ab4 - Cornelius Roemer, 2023-06-01 19:24:17 +0200 : Designate XBB.1.5.76 (ORF1a:T3696A, Chile) with 650 seqs
b911018 - Cornelius Roemer, 2023-06-01 19:27:51 +0200 : Designate XBB.1.5.77 (T18732C, Colombia/USA) with 1300 seqs
f39a7c6 - Cornelius Roemer, 2023-06-01 19:33:13 +0200 : Designate XBB.1.5.78 (ORF1a:N460D, Mexico) with 250 seqs
0894cc7 - Cornelius Roemer, 2023-06-01 19:38:16 +0200 : Designate XBB.1.5.79 (N:Q260L, Mexico/USA) with 400 seqs
9640b11 - Cornelius Roemer, 2023-06-01 19:44:40 +0200 : Designate XBB.1.5.80 (A16812G, C21812T, USA/Romania) with 500 seqs
b5632de - Cornelius Roemer, 2023-06-01 19:50:39 +0200 : Designate XBB.1.5.81 (S:478R, G4657A, South Africa) with 20 seqs
5d18f8c - InfrPopGen, 2023-06-02 11:47:15 +0100 : Added new lineage GJ.1 from #2005 with 43 new sequence designations, and 2 updated from XBB.2.3.3
3e2dc19 - InfrPopGen, 2023-06-02 11:48:43 +0100 : Merge pull request #2033 from InfrPopGen/master
5ea2b89 - ciscorucinski, 2023-06-04 17:50:13 +0900 : fixed alias irregularity (ec9cb23)
5197b4a - Cornelius Roemer, 2023-06-06 17:09:00 +0200 : Designate FL.1.5 (S:456L (T22928C), ORF1b:K2557R, from #1985 and #2036) with 60 seqs
f231e5e - Cornelius Roemer, 2023-06-06 17:10:38 +0200 : Designate FL.1.5.1 (S:478R, from #2036) with 7 seqs
ed98932 - Cornelius Roemer, 2023-06-06 17:18:23 +0200 : Designate GK.1 (Alias of XBB.1.5.70.1, S:S704L, Brazil, from #2025) with 100 seqs
7c80458 - Cornelius Roemer, 2023-06-06 17:28:03 +0200 : Designate XBB.1.34.1 (S:E554K, ORF1b:P970L) with 20 seqs
ee0c54c - Cornelius Roemer, 2023-06-06 17:30:06 +0200 : Designate XBB.1.34.2 (S:K182I, ORF8:C90F, ORF1a:G989C) with 10 seqs
54905da - Angie Hinrichs, 2023-06-06 11:34:39 -0700 : Merge pull request #2035 from ciscorucinski/master
8f4b2eb - Cornelius Roemer, 2023-06-07 18:10:08 +0200 : Designate XCD (XBB.1*/BQ.1.1.25*, S:R214H, S:478I, Indonesia, from #2042) with 14 seqs
52a02da - Cornelius Roemer, 2023-06-07 18:33:05 +0200 : Designate XBB.8.2 (S:486P, ORF1a:A2529V, Reunion/Mayotte/Mauritius, from #1995) with 25 seqs
368ca3b - Cornelius Roemer, 2023-06-08 13:06:28 +0200 : Fix typo in lineages.csv (XBD -> XCD)
76b33d3 - Cornelius Roemer, 2023-06-09 20:20:19 +0200 : Designate EG.7 (S:R403K, S:L513F, ORF1a:N2531S, Germany/England) with 18 seqs
1e361de - Cornelius Roemer, 2023-06-09 20:27:59 +0200 : Designate GJ.1.1 (XBB.2.3.3.1.1, S:A222V, N:R319H, ORF1a:V1915I) with 30 seqs
71c4692 - Cornelius Roemer, 2023-06-09 20:29:46 +0200 : Designate GJ.2 (XBB.2.3.3.2, S:I1114S, Europe) with 50 seqs
0666c34 - Cornelius Roemer, 2023-06-09 20:39:22 +0200 : Designate FL.1.10.1 (S:E554K, C4234T, South Korea) with 50 seqs
55342b2 - Cornelius Roemer, 2023-06-09 20:47:37 +0200 : Designate XBB.1.41.1 (S:478R, France) with 10 seqs
11dc754 - Cornelius Roemer, 2023-06-09 20:59:34 +0200 : Designate XCE (BQ.1* and FY.1 (XBB.1.22.1.1), Indonesia, South Korea, France, from lineage-proposals#123) with 45 seqs
74eed87 - Cornelius Roemer, 2023-06-09 21:14:25 +0200 : Designate FE.1.1.1 (ORF1a:T999I, North America) with 180 seqs
80ddb92 - Cornelius Roemer, 2023-06-09 21:16:00 +0200 : Designate FE.1.1.2 (S:K1086R, Brazil/USA) with 28 seqs
66919aa - Cornelius Roemer, 2023-06-09 21:27:08 +0200 : Designate GL.1 (Alias of XAY.1.1.1.1, Europe, S:D420N, C19441T, from issue #2032) with 7 seqs
53552f5 - Cornelius Roemer, 2023-06-10 13:05:28 +0200 : Designate GM.1 (XBB.2.3.6.1, S:P621S, Singapore) and GM.2 (S:G181R) with 90/40 seqs
8318e02 - Cornelius Roemer, 2023-06-10 13:09:02 +0200 : Designate XCF (XBB* and FE.1 (XBB.1.18.1.1), possibly South America, from lineage-proposals#2) with 30 seqs
e0b8222 - Cornelius Roemer, 2023-06-10 13:14:09 +0200 : Designate BQ.1.1.75 (S:K182N, S:F456L, Reunion) with 15 seqs
d2202b0 - Cornelius Roemer, 2023-06-10 13:16:37 +0200 : Designate XBB.1.5.82 (S:K444R, Sweden/Reunion) with 50 seqs
18ff637 - Cornelius Roemer, 2023-06-10 13:19:55 +0200 : Designate XBB.1.5.83 (A10624G, South Africa) with 70 seqs
6afe413 - Cornelius Roemer, 2023-06-10 13:56:40 +0200 : Designate XBB.1.5.84 (S:M177I, South Africa) with 100 seqs
f29a65f - Cornelius Roemer, 2023-06-10 13:59:08 +0200 : Designate GN.1 (XBB.1.5.73.1, S:F456L (22928C), Peru/Costa Rica) with 25 seqs
c2c8d97 - Cornelius Roemer, 2023-06-10 14:09:16 +0200 : Designate XBB.1.5.85 (S:L176F, S:478R, Trinidad and Tobago/Hong Kong) with 50 seqs
7bb717e - Cornelius Roemer, 2023-06-10 14:12:05 +0200 : Designate XBB.1.5.86 (ORF1a:G2868S, Brazil) with 600 seqs
b43c4a6 - Cornelius Roemer, 2023-06-10 16:01:22 +0200 : Designate DV.7 (S:T883I, ORF1a:A3548V, England, from #2038) with 280 seqs
12de9c5 - Cornelius Roemer, 2023-06-10 16:04:45 +0200 : Designate DV.8 (S:Q613H, C8299T, C19602T, Sweden) with 150 seqs
12df5b7 - Cornelius Roemer, 2023-06-10 16:06:39 +0200 : Designate CH.1.1.29 (S:613H, ORF1a:P371S, Europe/Canada) with 28 seqs
cbd5a7b - Cornelius Roemer, 2023-06-10 16:12:27 +0200 : Designate DV.6.1 (S:Q613H, T15591C, Central Europe), DV.6.2 (S:Q613H, C6628T, C18032T, Asia)
15e25ea - Cornelius Roemer, 2023-06-10 16:18:06 +0200 : Designate GK.1 (CH.1.1.11.1, S:Q52H, ORF7a:T28I, Europe) with 130 seqs
a83fc90 - Cornelius Roemer, 2023-06-10 19:18:58 +0200 : Designate GK.2 (ORF6:S41F, T13450C, Europe) with 600 seqs
bd51bb3 - Cornelius Roemer, 2023-06-10 19:21:41 +0200 : Fix typos in lineage_notes.txt and lineages.csv
e641053 - Cornelius Roemer, 2023-06-10 19:36:47 +0200 : Designate GP.3 (T5218C, A16878G, A26519G, C29236T, Ireland) with 400 seqs
c23ed47 - Cornelius Roemer, 2023-06-10 19:40:43 +0200 : Designate FK.1.2.2 (ORF1a:D139N, ORF1a:R226K, ORF1a:Q556K, ORF3a:T64N, T11737C, AUS/NZ) with 120 seqs
a024061 - Cornelius Roemer, 2023-06-10 19:48:15 +0200 : Designate FR.1.3 (ORF1a:A206V, ORF1b:A517V, N:G34E, China, from #2039) with 90 seqs
9e6fb7e - Cornelius Roemer, 2023-06-10 19:51:57 +0200 : Designate BN.1.3.12 (C14358T, T22672C, South Korea/Thailand/Germany) with 900 seqs
ee667ae - Cornelius Roemer, 2023-06-10 20:00:20 +0200 : Designate BQ.1.1.76 (C15180T, Slovenia/Austria) with 200 seqs
ae88611 - Cornelius Roemer, 2023-06-10 20:04:05 +0200 : Designate BQ.1.1.77 (C12853T, ORF1b:A1428V, USA/France) with 350 seqs
b1577fa - Cornelius Roemer, 2023-06-10 20:06:33 +0200 : Designate BQ.1.1.78 (ORF1a:M315I, ORF1b:P1953L, Japan) with 550 seqs
c67010a - Cornelius Roemer, 2023-06-10 20:11:21 +0200 : Designate EN.1.1 (BQ.1.1.46.1.1, S:M153I, France) with 110 seqs
ff71f8b - Cornelius Roemer, 2023-06-10 20:22:15 +0200 : Designate XBC.1.7 (S:478R, S:444T, Philippines/Australia/Hong Kong) with 6 seqs
0910a30 - Cornelius Roemer, 2023-06-10 20:25:17 +0200 : Designate XBC.1.1.2 (S:L244F, ORF7b:L32F, Australia) with 100 seqs
aecb12c - Cornelius Roemer, 2023-06-10 20:30:40 +0200 : Designate XBL.3.1 (S:I726V, C10252T, G29702A, Singapore/South Korea/Thailand) with 50 seqs
601ce04 - Cornelius Roemer, 2023-06-10 20:33:50 +0200 : Designate GQ.1 (CH.1.1.3.1, S:486P, ORF1a:H1545Q, ORF1b:V1520L, Australia/New Zealand, from #1872) with 30 seqs
bd2e9fe - Cornelius Roemer, 2023-06-10 20:36:45 +0200 : Designate CH.1.1.30 (ORF1a:Y2968H, C17913T, Germany/Netherlands/Austria) with 150 seqs
58dba75 - Cornelius Roemer, 2023-06-10 20:40:19 +0200 : Designate BR.5.1 (ORF1a:K2029N, ORF1b:T5923I, A20289G, South Korea) with 400 seqs
7c91309 - Cornelius Roemer, 2023-06-10 21:27:50 +0200 : Fix FL.1.10.1 -> FL.10.1 in lineages.csv
8634eda - Cornelius Roemer, 2023-06-10 21:30:39 +0200 : Fix typo in DV.7 lineage notes (S:T883I -> S:L858I)
79e18fa - Cornelius Roemer, 2023-06-11 15:53:50 +0200 : Designate XBB.1.15.1 (S:486P, A19464G, C9803T, Brazil/Chile/USA) with 50 seqs
7262a55 - Cornelius Roemer, 2023-06-11 16:06:30 +0200 : Designate XBB.1.44 (S:T747I, Russia) with 100 seqs
46bcf7b - Cornelius Roemer, 2023-06-11 16:08:20 +0200 : Designate XBB.1.44.1 (S:486P, ORF3a:S195F, Russia/China) with 60 seqs
bbe8cc9 - Cornelius Roemer, 2023-06-11 16:10:10 +0200 : Designate XBB.1.45 (T21000C, USA/Singapore/Malaysia) with 200 seqs
c6a8528 - Cornelius Roemer, 2023-06-11 16:11:38 +0200 : Designate XBB.1.45.1 (S:486P, A3139G, A19137G, C28291T, USA/Portugal) with 200 seqs
234edc5 - Cornelius Roemer, 2023-06-11 16:14:06 +0200 : Designate EU.1.1.2 (S:A1070S, Germany/Finland/Denmark/Sweden) with 60 seqs
9119c66 - Cornelius Roemer, 2023-06-11 16:17:26 +0200 : Designate XBB.1.46 (ORF1a:C1114F, Singapore/Malaysia) with 100 seqs
f8145b4 - Cornelius Roemer, 2023-06-11 16:20:41 +0200 : Designate XBB.1.47 (ORF1a:T1761I, ORF1a:C2180Y, ORF1a:I2854V, Philippines/Singapore/Japan) with 29 seqs
3578f58 - Cornelius Roemer, 2023-06-11 16:22:46 +0200 : Designate XBB.1.47.1 (S:486P, S:A260V, S:V1122G, Japan/USA/Australia/Germany) with 15 seqs
6088c2a - Cornelius Roemer, 2023-06-11 17:53:46 +0200 : Fix #2048
ed1d959 - Cornelius Roemer, 2023-06-11 17:54:59 +0200 : Add issue to lineage notes for XBB.1.44.1
e62473e - Cornelius Roemer, 2023-06-11 18:06:34 +0200 : Designate XBB.2.11 (C18129T) with 800 seqs
829ec77 - Cornelius Roemer, 2023-06-11 18:08:02 +0200 : Designate XBB.2.11.1 (C4084T, C9559T, T16521C, USA) with 700 seqs
ec8647d - Cornelius Roemer, 2023-06-11 18:28:27 +0200 : Designate XCG (BA.5.2* and XBB.1, Mexico) with 45 seqs
e6a5751 - Cornelius Roemer, 2023-06-11 18:30:24 +0200 : Designate XBB.1.14.1 (S:N148T, N:A211S, Russia) with 80 seqs
7e54754 - Cornelius Roemer, 2023-06-11 18:32:40 +0200 : Add extra XBB.1.12 designations
e229f29 - Cornelius Roemer, 2023-06-11 18:36:20 +0200 : Designate XBB.2.6.3 (S:T883I, C25587T, Peru) with 80 seqs
d980960 - Cornelius Roemer, 2023-06-11 18:39:19 +0200 : Designate XBB.1.48 (S:L455F, S:F456L (22928C), C2509T, Pakistan) with 15 seqs
e2f7eda - Cornelius Roemer, 2023-06-11 18:43:04 +0200 : Designate XBB.1.13.1 (S:Q564E, S:N856K, Czechia) with 50 seqs
6fc2794 - Cornelius Roemer, 2023-06-11 18:44:53 +0200 : Designate XBB.1.38.1 (S:T883I, Russia) with 80 seqs
bd0a138 - Cornelius Roemer, 2023-06-11 18:46:59 +0200 : Designate XBB.1.4.2 (S:486P, ORf1a:V3595F, Brazil) with 80 seqs
3b3512d - Cornelius Roemer, 2023-06-11 18:53:06 +0200 : Designate XBB.2.12 (S:Q613H (G23401C), C4090T, T24194C, India) with 60 seqs
172fab8 - Cornelius Roemer, 2023-06-12 16:54:37 +0200 : Designate FL.2.3 (ORF1b:K1383R, China, from #2016) with 600 seqs
34d95bc - ciscorucinski, 2023-06-12 23:56:25 +0900 : fixed delimiter irregularity
8ccb7e4 - Cornelius Roemer, 2023-06-12 16:59:08 +0200 : Designate FY.1.2 (S:T572I, ORF1b:P218L, Europe) with 70 seqs
6043842 - Cornelius Roemer, 2023-06-12 17:00:24 +0200 : Designate FY.1.3 (S:E583D, South Korea) with 40 seqs
2e88648 - Cornelius Roemer, 2023-06-12 17:03:46 +0200 : Designate FY.5 (S:478R, Indonesia, from #1965) with 70 seqs
6a1de6c - Cornelius Roemer, 2023-06-12 17:06:36 +0200 : Designate FL.2.2.1 (S:T307I, Indonesia) with 100 seqs
538a81d - ciscorucinski, 2023-06-13 00:08:04 +0900 : fixed values to conform to the standard, full-unaliased notation
456e432 - ciscorucinski, 2023-06-13 00:09:12 +0900 : fixed alias irregularity
92b7e62 - Cornelius Roemer, 2023-06-12 17:14:09 +0200 : Designate XBB.1.16.10 (N:G25D, from #1984) with 120 seqs
c5ee86c - Cornelius Roemer, 2023-06-12 17:16:43 +0200 : Designate FL.16 (S:D215V, C3511T, China, from #2001) with 120 seqs
5d87ef1 - Cornelius Roemer, 2023-06-12 17:23:43 +0200 : Designate GR.1 (XBB.1.5.42.1, S:445S, Vietnam) with 400 seqs
02fd193 - Cornelius Roemer, 2023-06-12 17:29:59 +0200 : Designate GB.2 (XBB.1.5.46.2, S:478R, England/China, from #1891) with 100 seqs
8b5400c - Cornelius Roemer, 2023-06-12 17:33:16 +0200 : Designate GS.1 (XBB.2.3.11.1, S:213D, C4582T, C25075T, Australia, from #2023) with 60 seqs
32fec0a - Angie Hinrichs, 2023-06-12 11:09:05 -0700 : Merge branch 'master' into feature/irregularity/alias_key_values
22b23b1 - Angie Hinrichs, 2023-06-12 11:13:26 -0700 : Merge pull request #2050 from ciscorucinski/feature/irregularity/alias_key_values
121ea19 - Angie Hinrichs, 2023-06-12 11:13:45 -0700 : Merge pull request #2051 from ciscorucinski/feature/fix/fr.1.3
54ee705 - Angie Hinrichs, 2023-06-12 11:15:04 -0700 : Merge pull request #2049 from ciscorucinski/feature/irregularity/lineage_notes_delimiter
e4d4879 - Cornelius Roemer, 2023-06-13 12:27:32 +0200 : Designate XBB.1.5.87 (S:478R, ORF1a:E1633K, ORF1a:M1588K, C9763T, C20946T, Indonesia) with 15 seqs
13ec39a - Cornelius Roemer, 2023-06-13 12:29:44 +0200 : Designate FL.1.6 (S:N481K, S:Q1208H) with 12 seqs
3a48f1e - Cornelius Roemer, 2023-06-14 15:03:38 +0200 : Designate FL.17 (T3898C, C28333T) with 350 seqs
0f9b147 - Cornelius Roemer, 2023-06-14 15:04:56 +0200 : Designate FL.17.1 (S:N74H, South Korea) with 80 seqs
c9a439f - Cornelius Roemer, 2023-06-14 15:06:39 +0200 : Designate FL.17.2 (S:L452R, from sars-cov-2-variants/lineage-proposals#53) with 14 seqs
63a115e - Cornelius Roemer, 2023-06-14 15:09:03 +0200 : Designate XBB.1.16.11 (S:P521, India) with 100 seqs
93f041c - Cornelius Roemer, 2023-06-14 15:13:41 +0200 : Designate XBC.1.6.4 (ORF1a:V1117I, T20286C, Australia) with 80 seqs
714cc20 - Cornelius Roemer, 2023-06-14 15:16:13 +0200 : Designate GT.1 (XBC.1.6.1.1, S:I105V, C28333T, Australia) with 30 seqs
1c07d8a - Christopher Rucinski, 2023-06-20 21:53:48 +0900 : fixed alias irregularity (fixes #2060) (#2062)
df09d9d - Cornelius Roemer, 2023-06-20 15:24:57 +0200 : Designate FU.2.1 (XBB.1.16.1.2.1, S:E619Q, Vietnam) with 61 seqs
bbd9acc - Cornelius Roemer, 2023-06-20 15:29:35 +0200 : Designate GU.1 (XBB.1.5.41.1, S:N481S, USA/Canada) with 160 seqs
dc41211 - Cornelius Roemer, 2023-06-20 15:32:53 +0200 : Designate GV.1 (XBB.1.5.48.1, S:478R) with 90 seqs
3bdba24 - Cornelius Roemer, 2023-06-20 15:37:48 +0200 : Designate FL.4.3 (XBB.1.9.1.4.3, S:A766S, G7393T, Myanmar) with 50 seqs
ed0af50 - InfrPopGen, 2023-06-20 16:46:33 +0100 : Added new lineage EG.5.1.1 from #2020 with 68 new sequence designations, and 0 updated
0fdd904 - InfrPopGen, 2023-06-20 16:48:39 +0100 : Merge pull request #2063 from InfrPopGen/master