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  1. MiCall MiCall Public

    Pipeline for processing FASTQ data from an Illumina MiSeq to genotype human RNA viruses like HIV and hepatitis C

    Python 14 9

  2. Kive Kive Public

    Archival and automation of bioinformatic pipelines and data

    Python 8 1

  3. pyvdrm pyvdrm Public

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  4. MiSeqQCReport MiSeqQCReport Public

    Quality control report for the MiSeq.

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  5. make_tree make_tree Public

    Simple script for drawing phylogenetic trees

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  6. CFEIntact CFEIntact Public

    A bioinformatics tool for detecting defects in HIV-1 proviral sequences.

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Repositories

Showing 10 of 56 repositories
  • CFEIntact Public

    A bioinformatics tool for detecting defects in HIV-1 proviral sequences.

    Python 2 MIT 0 4 0 Updated Apr 29, 2024
  • MiCall Public

    Pipeline for processing FASTQ data from an Illumina MiSeq to genotype human RNA viruses like HIV and hepatitis C

    Python 14 AGPL-3.0 9 121 9 Updated Apr 29, 2024
  • sds-viewer Public

    Public record of BC CfE Safety Data Sheets (SDS)

    Python 0 0 0 0 Updated Apr 29, 2024
  • aligntools Public

    A Python library for manipulation of CIGAR, MSA, and other alignment formats.

    Python 1 AGPL-3.0 0 0 0 Updated Mar 20, 2024
  • HIVIntact Public archive Forked from ramics/HIVIntact

    A proviral intactness pipeline.

    Python 0 3 0 0 Updated Mar 14, 2024
  • proviral Public
    Python 0 0 3 4 Updated Mar 7, 2024
  • accsense-scrape Public

    Download alarm history from temperature sensors

    Python 0 MIT 0 0 0 Updated Feb 14, 2024
  • Kive Public

    Archival and automation of bioinformatic pipelines and data

    Python 8 BSD-3-Clause 1 82 19 Updated Jan 26, 2024
  • bblab-server Public

    Useful tools for HIV research from the Brockman and Brumme Lab at SFU

    Python 0 1 7 1 Updated Sep 20, 2023
  • make_tree Public

    Simple script for drawing phylogenetic trees

    Python 2 GPL-3.0 1 0 0 Updated Jul 31, 2023

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