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68 Open 94 Closed
68 Open 94 Closed
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Issues list

Problems during model training.
#192 opened Apr 6, 2024 by amingc3
7
Prepare data
#191 opened Apr 3, 2024 by amingc3
1
Reproduce the Enformer's input sequences split
#190 opened Mar 5, 2024 by sararb
1
Issue with final matrix?
#188 opened Jan 11, 2024 by 16nbb1
When using Akita for single-cell prediction on the HCT116 cell line, the Pearson correlation coefficient is much lower.
#186 opened Nov 25, 2023 by 1944498970
8
How to convert the keras model to a basenji model
#180 opened Oct 9, 2023 by houruiyan
1
Stable environment configuration
#179 opened Sep 27, 2023 by tzhu-bio
1
handling blacklist\unmappable
#176 opened Aug 21, 2023 by yardenmatok203
1
Expose 'raw' as an argument?
#173 opened Aug 10, 2023 by Yaoyx
2
.hic
#172 opened Aug 6, 2023 by yardenmatok203
None in maps
#171 opened Jul 29, 2023 by yardenmatok203
4
Problem with calculating the target based on the gene sequence
#170 opened Jul 24, 2023 by wananal
1
No checkpoints found.
#169 opened Jul 19, 2023 by houruiyan
1
distiller
#168 opened Jul 8, 2023 by yardenmatok203
6
Weird targets
#167 opened Jul 1, 2023 by yardenmatok203
2
Output regions from Akita
#166 opened Jun 21, 2023 by ahmedabbas811
1
error with akita_data. py
#165 opened Jun 17, 2023 by yardenmatok203
3
Question about Gene Expression Training Preprocessing
#161 opened May 5, 2023 by wkl1990
3
akita can't train
#160 opened Apr 16, 2023 by bioczsun
1
Tensorflow records generated with basenji_data.py differ from original
#159 opened Apr 13, 2023 by icdh99
1
Problem with multigenome training with > 2 genomes
#158 opened Apr 12, 2023 by raphaelmourad
1
Training with multiple directories
#157 opened Apr 6, 2023 by raphaelmourad
1
Issue running basenji_data.py
#154 opened Mar 21, 2023 by petnas
2
Basenji Features used for Whole Blood Fine-Mapping
#153 opened Mar 21, 2023 by aga-relation
3
No checkpoints found.
#147 opened Feb 20, 2023 by wittney-m
3
ProTip! Updated in the last three days: updated:>2024-05-01.