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225 Open 854 Closed
225 Open 854 Closed
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Issues list

broken after five-day running
#1288 opened May 6, 2024 by B1991ing
1
spades-core: /opt/conda/conda-bld/spades_1664217775513/work/src/project/spades/main.cpp:101: int main(int, char**): Assertion `cfg::get().K >= runtime_k::MIN_K && cfg::get().K < runtime_k::MAX_K' failed.finished abnormally, OS return value: -6
#1284 opened Apr 29, 2024 by GuillaumeDore11
1 task done
@andrewprzh
2
== Error == finished abnormally, OS return value: -11 io Input / output (e.g. due to disk storage) errors
#1277 opened Apr 16, 2024 by efe3506
1 task done
5
Test dataset does not work, spades-hammer fails
#1272 opened Apr 12, 2024 by Pigrenok
1 task done
2
I keep runnning into "finished abnormally, err code: -11" outdated Issues with legacy SPAdes versions wsl Issues with unsupported WSL/WSL2
#1267 opened Mar 28, 2024 by Wanjofu
1 task done
2
After upgrading to python3.12 : Error importing LooseVersion from distutils. Now needs to come directly from looseversion.
#1266 opened Mar 26, 2024 by haslamdb
1
== Error == system call for: "['/usr/lib/spades/bin/spades-core', '/home/ifb/rnaSPAdemount/K55/configs/config.info', '/home/ifb/rnaSPAdemount/K55/configs/mda_mode.info', '/home/ifb/rnaSPAdemount/K55/configs/rna_mode.info']" finished abnormally, err code: -6 io Input / output (e.g. due to disk storage) errors
#1262 opened Mar 22, 2024 by adsas45
1 task done
1
Error value:-9 None
#1260 opened Mar 19, 2024 by Marysabl
1 task done
3
* system call for: "['/usr/lib/spades/bin/spades-core', '/home/bilsab/esra/tabenoids/FastUniq/source/combined_spades_output_4/K33/configs/config.info']" finished abnormally, err code: -9
#1258 opened Mar 15, 2024 by esbusis
1 task done
1
Error == system call for: ....." finished abnormally, OS return value: -6 None when running rnaspades
#1255 opened Mar 7, 2024 by komorn
1 task done
1
The number of contigs generated is significantly lower than expected
#1252 opened Mar 1, 2024 by liusihang
1 task done
2
Exception caught Cannot open file XXX/.bin_reads/paired_0.off': iostream error io Input / output (e.g. due to disk storage) errors
#1250 opened Feb 27, 2024 by gorfol
1 task done
4
finished abnormally, OS return value: -11 and source code intasll error
#1249 opened Feb 27, 2024 by 2110537
1 task done
8
getting error while running spades.py error : finished abnormally, OS return value: -11
#1248 opened Feb 21, 2024 by rishidash12
1 task done
6
Spades not showing any output after starting processing read Two
#1242 opened Feb 8, 2024 by Shaileshdesai76
1 task done
5
Is repeat resolution necessary in large-scale metagenomics?
#1241 opened Feb 3, 2024 by yqy6611
1 task done
spades-core terminated automatically during k-mer counting without errors
#1237 opened Jan 22, 2024 by yqy6611
1 task done
4
algorithm difference
#1236 opened Jan 20, 2024 by zzsunday
1
Error during --test execution: The program was terminated by segmentation fault
#1230 opened Jan 2, 2024 by lucolotto
1 task done
5
The program was terminated by segmentation fault
#1228 opened Dec 29, 2023 by laribritto
1 task
1
Error:spades-hammer ,finished abnormally, OS return value: -9
#1226 opened Dec 21, 2023 by JianxiongZeng
1 task done
2
curl http://cab.spbu.ru/files/release3.15.5/SPAdes-3.15.5-Darwin.tar.gz -o SPAdes-3.15.5-Darwin.tar.gz doesnt work
#1225 opened Dec 17, 2023 by scholaraspect
1 task done
1
Can rnaSPAdes count the numbers of genes and transcripts in the RNA-seq analysis like the TrinityStats.py script in Trinity software?
#1221 opened Dec 5, 2023 by luwd401
2
Is the orientation parameter necessary when running metaviral with illumina PE RNASeq datasets?
#1213 opened Nov 20, 2023 by grendon
2
Spades assembly outputing an empty file io Input / output (e.g. due to disk storage) errors
#1209 opened Nov 13, 2023 by MittelheiserL
1 task done
2
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