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Issues list

How to run ParaFold in the CPU mode on a machine with GPU.
#45 opened Apr 18, 2024 by Tiramisu023
kalign glitch
#44 opened Feb 3, 2024 by erdaqorri
Why not recommend install by docker?
#43 opened Jan 22, 2024 by Autumn-Roy
hhalignment.cpp:3539: MergeMasterSlave
#42 opened Sep 18, 2023 by Licko0909
1
known good nvidia driver?
#41 opened Sep 3, 2023 by rocketman8080
The GPU step is requiring large amounts of CPU VMEM
#40 opened Sep 1, 2023 by johnire80
Run on GPU Error
#39 opened Aug 22, 2023 by erdaqorri
3
Multimer prediction error: "ValueError: Unable to retrieve parameter 'scale' for module......."
#38 opened Aug 3, 2023 by tclin422
5
Distributed database usage
#35 opened Apr 14, 2023 by juankaamez
Has CPU acceleration (the parallelization of the 3 library lookup) been implemented in this repo yet?
#34 opened Mar 22, 2023 by cmkstien
1
pdb_seqres_database_path must not be set when running with "--model_preset=monomer_casp14".
#33 opened Mar 18, 2023 by mbassalbioinformatics
About the test datasets
#32 opened Mar 18, 2023 by xihongshilamu
Where is the run_figure.py file?
#29 opened Mar 2, 2023 by beaulian
1
Parafold run failing since pulling latest changes
#27 opened Feb 28, 2023 by gauravdiwan89
8
Is CPU acceleration failed?
#26 opened Aug 25, 2022 by yanchenmochen
3
Could not find HHsearch database
#24 opened Aug 23, 2022 by YiningWang2
failed to alloc 2147483648 bytes on host: CUDA_ERROR_OPERATING_SYSTEM: OS call failed or operation not supported on this OS
#23 opened Aug 16, 2022 by yanchenmochen
3
Too many command-line arguments
#22 opened Jun 21, 2022 by AnaValero
1
Alphafold2 v/s Parafold timings
#21 opened Apr 29, 2022 by adi1bioinfo
1
An error in feature generation
#20 opened Mar 7, 2022 by YiningWang2
1
GPU computing is slow
#19 opened Mar 3, 2022 by chenshixinnb
3
is CPU acceleration available in this repo?
#17 opened Jan 17, 2022 by wttat
3
why is run_figure.py down now?
#7 opened Nov 18, 2021 by RodenLuo
2
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