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Disable dask query-planning #673

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merged 1 commit into from Mar 13, 2024
Merged

Disable dask query-planning #673

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2 changes: 2 additions & 0 deletions apis/python/src/tiledbvcf/dask_functions.py
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@@ -1,4 +1,6 @@
import dask

dask.config.set({"dataframe.query-planning": False})
import dask.dataframe

import pyarrow as pa
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2 changes: 2 additions & 0 deletions apis/python/tests/test_dask.py
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Expand Up @@ -5,6 +5,8 @@
import tiledbvcf

import dask

dask.config.set({"dataframe.query-planning": False})
import dask.distributed

# Directory containing this file
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2 changes: 2 additions & 0 deletions documentation/how-to/perform-distributed-queries-with-dask.md
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Expand Up @@ -10,6 +10,8 @@ You can use the `tiledbvcf` package's Dask integration to partition read operati
import tiledbvcf
import dask

dask.config.set({'dataframe.query-planning': False})

ds = tiledbvcf.Dataset('my-large-dataset', mode='r')
dask_df = ds.read_dask(attrs=['sample_name', 'pos_start', 'pos_end'],
bed_file='very-large-bedfile.bed',
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