MATACseq

This repository contains notebooks and processed binary data from nanopore sequencing to reproduce the results of our MATAC-seq manuscript (https://www.biorxiv.org/content/10.1101/2023.03.14.532513v1).

Name		Name	Last commit message	Last commit date
Latest commit History 13 Commits
ARS305		ARS305
ARS313		ARS313
ARS315		ARS315
ARS316		ARS316
LICENSE		LICENSE
README.md		README.md
clustering_ARS305.ipynb		clustering_ARS305.ipynb
clustering_ARS313.ipynb		clustering_ARS313.ipynb
clustering_ARS315.ipynb		clustering_ARS315.ipynb
clustering_ARS316.ipynb		clustering_ARS316.ipynb
conda_env.yml		conda_env.yml
methylation_analysis_20220502_ARS305.ipynb		methylation_analysis_20220502_ARS305.ipynb
methylation_analysis_20220502_ARS313.ipynb		methylation_analysis_20220502_ARS313.ipynb
methylation_analysis_20220502_ARS315.ipynb		methylation_analysis_20220502_ARS315.ipynb
methylation_analysis_20220502_ARS316.ipynb		methylation_analysis_20220502_ARS316.ipynb
methylation_analysis_controls.ipynb		methylation_analysis_controls.ipynb

ScialdoneLab/MATACseq