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Plug-in Gait KAD & KADMed variants #40

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Plug-in Gait KAD & KADMed variants #40

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Implementation of the KAD and KADMed variants of the Plug-in Gait model. The calibration and reconstruction steps for these variants are validated against reference data generated by Nexus 2.3 & 2.5.

@Alzathar
New static properties to get/set supplementary offset associated with…
8368bb9 
… the Plug-in Gait model.
@Alzathar
New option in the Plug-in Gait constructor to choose the "variant" to…
d174d73 
… use. WARNING: Currrently, this variant has no effect! Only the basic model is implemented.
@Alzathar
Marker names mapping for the KAD and KADMed variants added.
4ba9627
@Alzathar
[WIP] Code refactored for the calibration of the knee joint centre an…
96f5c05 
…d ankle joint centre using the KAD.
@Alzathar
s/computeHipJointCenter/computeHipJointCentre.
10bab50
@Alzathar
Modification of the method ma::math::XprBase::relicate to be able to …
a1eb16f 
…replicate columns.
@Alzathar
New method ma::math::XprBase::dot().
6fb2436
@Alzathar
New method to compute coefficient-wise product between two ma::math::…
130567a 
…XprBase objects.
@Alzathar
New method ma::math::XprBase::atan2.
c459220
@Alzathar
Computation of the ThighRotation offset for the Plug-in Gait KAD vari…
b0f3273 
…ant.
@Alzathar
Code cleanup.
72b3cb6
@Alzathar
Computation of the shank marker rotation offset done.
0bb45a5
@Alzathar
Comparison for the foot offset angles activated.
749824e
@Alzathar
Adaptation of the chord function for the KAD.
a30494f
@Alzathar
Integration of the thigh and shank offsets in the computation of the …
86b4351 
…SCSs.
@Alzathar
Unit tests added for the model PiG + KAD + foot flat options activated.
798c83a
@Alzathar
Suffix 'Offset' added to the members '*TibialTorsion' and '*AnkleAbAd…
343f9dc 
…d' and associated methods.
@Alzathar
Use of function pointers to reconstruct segments (thigh and shank) in…
33eddb8 
…stead of conditions.
@Alzathar
Variables declaration were not adapted to the addition of the suffix …
37020d5 
…'Offset' (see commit 343f9dc).
@Alzathar
Fix an error in the computation of the feet offsets when the KAD is u…
4d89f32 
…sed.
@Alzathar
Remove extra spaces for commented input names.
f6d9065
@Alzathar
[WIP] Computation ot the (Left|Right)TibialTorsionOffset parameters f…
ceae1ce 
…or the KADMed variant. Modifications were also realized about the reconstruction of the thigh and shank SCS.
@Alzathar
Computation of the (Left|Right)AnkleAbAddOffset parameters.
ab5aaeb
@Alzathar
Validation of the computation for the shank offsets using the KADMed …
85d636b 
…variant.
@Alzathar
[WIP] Reconstruction of the untortioned tibia implemented. WARNING: T…
aef5150 
…he defintion of the ankle joints is currently wrong with the KADMed variant!
@Alzathar
Symbol M_PI not defined by default with MSVC.
f8c6b45
@Alzathar
Fix an error on the computation of the thigh and shank offsets (wrong…
3cb6804 
… sign in some cases).
@Alzathar
New unit test related to the commit 3cb6804.
95fb04a
@Alzathar
Unit test for the Python bindings related to calibration of the Plug-…
82a0168 
…in Gait model.
@Alzathar
Unit tests *FullBodyFrameKAD* renamed *FullBodyKAD*.
13947de
@Alzathar
New unit test for the KADMed variant.
08c5500
@Alzathar
Hidden way to compare the reconstruction of the Foot reference frame …
92e388c 
…of the original PiG KADMed variant.
@Alzathar
Supplementary test to compute the joint angles for the KADMed variant.
5f62aaf
@Alzathar
Variable v_tibia_tortioned renamed v_shank_torsioned to stay consiste…
7fe919b 
…nt with the rest of the code.
@Alzathar
A new segment is created to represent the torsioned shank in the plug…
aff9937 
…-in gait model. IMPORTANT: This is a workaround solution as the shank should be represented only by a single segment. The 'body' module must be improved to offer this possibility (ie. refactor the way an anchor is defined).
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Coverage Status

Coverage increased (+0.01%) to 81.071% when pulling aff9937 on plugin-gait-kad into b321ac2 on master.

@coveralls
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Coverage Status

Coverage increased (+0.01%) to 81.071% when pulling 91f2b40 on plugin-gait-kad into b321ac2 on master.

@coveralls
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Coverage Status

Coverage increased (+0.008%) to 81.178% when pulling 191066d on plugin-gait-kad into 0bb6645 on master.

@Alzathar Alzathar added this to the 1.0 milestone Dec 17, 2016
@Alzathar Alzathar self-assigned this Dec 17, 2016
@Alzathar Alzathar changed the title Plug-in gait KAD & KADMed variants Plug-in Gait KAD & KADMed variants Dec 17, 2016
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Coverage Status

Coverage increased (+0.002%) to 81.299% when pulling afad86b on plugin-gait-kad into 291dcd1 on master.

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Plug-in Gait Model
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@Alzathar @coveralls