Popular repositories

1. EPIC EPIC Public

   Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.

   R 70 21

2. SuperCell SuperCell Public

   Coarse-graining of large single-cell RNA-seq data into metacells

   R 56 10

3. MixMHC2pred MixMHC2pred Public

   HLA-II ligand predictor.

   C++ 31 10

4. MixMHCpred MixMHCpred Public

   HLA-I ligand predictor

   Python 24 7

5. PRIME PRIME Public

   PRedictor of IMmunogenic Epitopes

   C++ 15 3

6. MixTCRpred MixTCRpred Public

   Predictor of TCR-epitope interactions

   Python 11 3