Major additions with this version include:
- new tutorials and example models to help users get started with starting new projects
- extended DynaSim compatibility through MATLAB 2021
- minor fixes and cosmetic improvements
What's Changed
- Iss378 analyze by @erik-roberts in #383
- plot2svg: bar plot fix for arbitrary bar separation by @kupiqu in #384
- Iss385 posthoc results by @erik-roberts in #387
- iss #389 initial fix by @erik-roberts in #390
- Iss378 analyze by @erik-roberts in #392
- iss #393 done by @erik-roberts in #394
- plot2svg: fixed a figureSize issue by @kupiqu in #401
- fix iss #396 by @erik-roberts in #403
- remove try clause since not needed by @erik-roberts in #404
- fix iss #405 by @erik-roberts in #406
- Iss407 by @erik-roberts in #408
- fix #397 bug dsSim with no result save by @erik-roberts in #409
- fix #397 bug dsSim with no result save by @erik-roberts in #410
- iss #411 dsStandardizeModifications.m by @erik-roberts in #412
- close #413 by @erik-roberts in #414
- fix iss #415 dsPlot time_lim by @erik-roberts in #416
- fix iss #417 by @erik-roberts in #418
- Iss419 by @erik-roberts in #421
- Iss419 by @erik-roberts in #425
- iss #431 mex path ~ bug by @erik-roberts in #433
- iss #432 initial conditions in vary and param by @erik-roberts in #434
- fix rng_wrapper for Octave compatibility by @kupiqu in #435
- making tight_subplot2.m Octave compatible by @kupiqu in #436
- fix #439 by @erik-roberts in #440
- fix #441 by @erik-roberts in #442
- fix #398 by @erik-roberts in #443
- added ability to specify pops, cons, and mechs in equation strings by @jsherfey in #451
- Revert "fix #398" by @kupiqu in #452
- attempt to fix #437 by @kupiqu in #453
- Fix #398 for real this time by @asoplata in #459
- Iss465 matlab version by @asoplata in #466
- plot2svg: added scatter plot and colorbar support in Matlab >2014a by @kupiqu in #476
- plot2svg: fixed a bug not respecting figure's size by @kupiqu in #480
- plot2svg: exist cannot be used for struct fields, using isfield instead by @kupiqu in #483
- Iss93 gv by @erik-roberts in #487
- fix for issue #454 (LIF model error) by @kupiqu in #503
- Change default plot to PNG format, Resolve #460 by @asoplata in #515
- Add workaround for dsPlot2 spike monitor issue by @asoplata in #535
- Fix netconNearestNeighbors bug by @asoplata in #536
- dsAnalyze: commenting out '& isfield(result, 'time')' on line 893. by @benpolletta in #534
- plot2svg update by @kupiqu in #539
- plot2svg: fix 3d plots from octave by @kupiqu in #540
- workaround for issue #546 by @kupiqu in #547
- always inform the octave user when internally setting mex_flag to 0 by @kupiqu in #549
- fixed a bug in UIverlessthan.m by @kupiqu in #558
- from unmaintained plot2svg to maintained fig2svg by @kupiqu in #560
- defining sim_id in the parent function as requested by Matlab2019b by @kupiqu in #578
- RNG fixes by @kupiqu in #579
- Adding access to all state variables, not just the first by @kupiqu in #580
- Fix for stvar lines not being excluded by @kupiqu in #581
- added a flag for X_stvar_# aliases by @kupiqu in #582
- Fix for issue #550 by @kupiqu in #584
- defining sim in dsSimulate to avoid triggering errors in nested funct… by @kupiqu in #586
- cosmetic change by @kupiqu in #587
- Improve recursiveness in dsPropagateFunctions by @kupiqu in #588
- Allowing refering to parent function instead of state variable by @kupiqu in #589
- allowing whitespace between function variables by @kupiqu in #590
- fixing previous pull request by @kupiqu in #592
- adding elseif conditionals by @kupiqu in #593
- Reverting because of faulty behavior for the LIF model by @kupiqu in #594
- if-elseif-else conditionals by @kupiqu in #595
- allow passing parameters as column vectors by @kupiqu in #596
- making this last change Octave-compatible by @kupiqu in #597
- Added parameter arrays, fixed mex crash and removed repeated rng calls by @kupiqu in #598
- Fix issue with fixed variables + few changes in eksr by @kupiqu in #599
- List multiple connections in one connection element (e.g., (A,B)->C) by @jasonsherfey in #601
- Added ability to use connections.equations field for quick mechanism … by @jasonsherfey in #603
- fig2svg update by @kupiqu in #604
- fig2svg update by @kupiqu in #605
- fig2svg: fixed marker issues by @kupiqu in #606
- more efficient reportUI function by @kupiqu in #609
- more efficient reportUI function by @kupiqu in #610
- remove fig2svg (unmaintained) by @kupiqu in #612
- remove plot2svg (unmaintained) by @kupiqu in #613
- Dev by @jasonsherfey in #624
- eliminate unnecessary catch by @jsherfey in #625
- update dev by @jsherfey in #626
- Dev - fixed LIF indexing by @jsherfey in #627
- fix issue #399 by @kupiqu in #636
- fix issue #637 by @kupiqu in #638
- Fixed nonexistent linker reference and variable monitor by @jsherfey in #640
- fixes #641 by @kupiqu in #642
- cleanup by @kupiqu in #643
- Fixes #490 by @kupiqu in #644
- allow monitoring linkers by @sardid in #646
- fixed lhs regexp's by @kupiqu in #647
- implement simLog and set to 1 by default by @kupiqu in #648
- Multiple changes by @kupiqu in #649
- trigger an error if mechanism name is nowhere to be found by @sardid in #650
- one solve file to rule them all (time difference for 1D populations seems to be residual) by @kupiqu in #651
- more beautiful solve files and other cosmetic changes by @kupiqu in #652
- automatic CRLF to LF replacement by @kupiqu in #653
- DynaSim GUI restyling 1 and GNU Octave compatible by @kupiqu in #654
- load the statistics package for DynaSim GUI to run in Octave, if not … by @kupiqu in #655
- adding an async_flag to the DynaSim GUI by @kupiqu in #656
- Added unbiased competition model and live script by @smrqz in #658
- Live script tutorial for network resonance by @jsherfey in #660
- added oscillatory inputs and instantaneous FRs plots by @smrqz in #661
- fixed broken links and other minor changes by @smrqz in #662
- Live script tutorials improvements and DynaSim fix for issue #664 by @smrqz in #665
- parameter update on specification by @smrqz in #666
- DynaSim Library Project 2021 by @jsherfey in #667
Full Changelog: v1.0...v1.1
Contributors
asoplata, jsherfey, and 6 other contributors