Application of pan-genome for population
-
Updated
Jun 12, 2024 - Perl
Application of pan-genome for population
Structural variation and indel detection by local assembly
Structural variation caller using third generation sequencing
NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations
Toolset for SV simulation, comparison and filtering
MAMnet uses a deep learning network to call genetic variants from third generation DNA sequencing data.
Structural variant and indel caller for mapped sequencing data
Micro DNA identification
Pipeline for SV detection using 10X genomics data
novoBreak: local assembly for breakpoint detection in cancer genomes
A framework to annotate SVs with previous known SVs (vcf file) and or with genomic features (gff and or bed files)
Add a description, image, and links to the structural-variations topic page so that developers can more easily learn about it.
To associate your repository with the structural-variations topic, visit your repo's landing page and select "manage topics."