Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
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Updated
May 27, 2024 - Nextflow
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline
An R package for summarizing and visualizing association analysis results of whole-genome/whole-exome sequencing (WGS/WES) studies generated by STAARpipeline
The tutorial for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVORannotator, STAARpipeline and STAARpipelineSummary
Clinical Whole Genome and Exome Sequencing Pipeline
LOVD+ -- LOVD for diagnostics: analysis of whole-exome data using LOVD.
esohinformatics
An app for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline in UK Biobank RAP
STAR-NN: A deep neural network model to predict the risk of ASD using whole exome sequencing dataset
END OF MASTER'S PROJECT: Valencian International University VIU
An adaptable method for analyzing SNVs, INDELs, and CNVs from Whole Exome Sequencing (WES) data, emphasizing germline variants.
An app for automatically functionally annotating the variants of whole-genome/whole-exome sequencing (WGS/WES) studies and integrating the functional annotations with the genotype data using FAVORannotator in UK Biobank RAP
Whole Exome/Whole Genome Sequencing alignment pipeline
Workflows for whole-genome/exome sequencing data analysis
Analysis of paired tumor-normal whole exome sequencing data generated in a pilot open-access study of participants in Texas.
Automating WES Data analysis (primarily of Cancer).
An app for summarizing association analysis results of whole-genome/whole-exome sequencing (WGS/WES) studies in UK Biobank RAP
An app for summarizing association analysis results of whole-genome/whole-exome sequencing (WGS/WES) studies in UK Biobank RAP
Genetic Medicine of African Populations
Research projects conducted at the GeneMAP Research Center
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