Implement a non-server dependent coin flipper client as part of a IT-Security project in university.
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Updated
Nov 18, 2018 - Java
Implement a non-server dependent coin flipper client as part of a IT-Security project in university.
Sequencing data preprocessing
(Archived) This page is a record of my first formal NGS Project for Dr. Matesic of University of South Carolina (USC).
Download fastqs or supplementary files from GEO and upload to hca-util bucket
Pipeline for RNA-seq analysis
Automated mitochondrial genome assembly using SRA public data
Python wrapper created to help download metagenomic data from SRA or ENA databases
Proof of concept of a SRA to trimmed FASTQ (including quality control) pipeline with Nextflow
Tools, tricks, tips, and uses for SRA in the cloud
MetaQuest is a robust and user-friendly command-line toolkit designed to simplify and streamline the analysis of metagenomic data. From summarizing the presence of specific genomes to visualizing complex datasets, MetaQuest offers an array of tools to help researchers uncover insights from their metagenomic datasets.
Code for systematically classify data in SRA according to all the taxa present in the reads (SRA-metagenome)
An SRA library through which web assembly is provided as an interface to generate SRA public and private keys client side
R functions for querying Sean Davis' omicidx system
Independent project I undertook to perform a full ChIP-Seq analysis of the transcription factor Nanog in Zebrafish embryos.
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