Personalized reference editor for somatic mutation discovery
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Updated
Dec 2, 2022 - Java
Personalized reference editor for somatic mutation discovery
This R package repository performs optimal transport and kernel regression hypothesis testing. Functions to perform large scale simulations are also provided.
AI-based prediction of driver mutations
This repo contains an R package to execute ROKET's real data analysis workflow on TCGA cancer types
Snakemake Pipeline for the Analyses of ChIP-seq data in Cancer samples
a Nextflow SNV calling and annotation pipeline based on DKFZ-ODCF/SNVCallingWorkflow
This page is reserved for NextFlow based Indell Calling Workflow (with Platypus) from DKFZ
a Nextflow ACE-Seq calling and annotation pipeline based on DKFZ-ODCF/ACEseqWorkflow
Revealing Interspersed Variants into single compound complex indels
Lineage inference from Gene Therapy assays with insertional mutagenesis and somatic mutations
Depository for Bioinformatics Master Project HT2022-VT2023
Pipeline to call SNV's with 4 tools (VarDict, LoFreq, Mutect2 & SiNVICT)
R Shiny based lightweight mutation exploration tool
Galaxy Tool Shed repositories maintained and developed by the Morin Lab.
📦 An R package for inferring the mutational exposures difference between groups.
Polymorphic Edge Detection - An efficient polymorphism detector for NGS data
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