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lofreq

Here are 2 public repositories matching this topic...

rice-systems / lofreq-fpga

FPGA Acceleration for the LoFreq variant caller

bioinformatics fpga hls probability-distribution xilinx variant-calling bioinformatics-tool lofreq vitis-hls poisson-binomial-distribution counting-models

Updated Mar 10, 2024
C

nickveltmaat / SNVcaller

Pipeline to call SNV's with 4 tools (VarDict, LoFreq, Mutect2 & SiNVICT)

somatic-variants somatic-mutations snv ctdna snvs cfdna vardict mutect2 cell-free-dna snv-annotation indel lofreq sinvict

Updated Nov 8, 2022
Python

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