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May 15, 2017 - Shell
sequence-alignment
Here are 305 public repositories matching this topic...
Perl Implementation of a three different techniques for DNA sequence alignment to calculate similarity between 2 DNA sequences
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Oct 5, 2018 - Perl
Optimal Sequence Aligner allowing for Long Gaps
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May 19, 2020 - C++
Extract NEXUS partition blocks from a collection of concatenated alignments
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Mar 5, 2022 - Rust
Python scripts for performing bioinformatics for small read sequence alignment to reference genomes and SNP marker calling.
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Nov 8, 2023 - Python
DNA read mapping (seed-extension-aligner)
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Dec 18, 2017 - C++
Durham University Year 1 assignment to optimise simple sequence alignment scoring in bioinformatics implemented in Python
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Dec 19, 2020 - Python
Sequence Alignment tool
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Mar 24, 2024 - Perl
ColabSeq: The one-stop shop for all of your multiple sequence analysis needs.
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Apr 1, 2024 - Jupyter Notebook
Extracting forms character without messing up the sequence.
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Jun 30, 2019 - Python
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Jun 30, 2020 - Python
Local Sequence Alignment Tool for Probabilistic DNA databases
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Sep 25, 2020 - Python
CRAN R Packaged published 2021. Sequence Alignment with Non-Uniform Time Intervals: an algorithm for the comparison of two sequences in time.
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Mar 7, 2022 - R
A program that uses the Synteny Index algorithm to compare between Eukaryotes.
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Jan 3, 2023 - Perl
This is a Bayesian model for sequence and structure alignment of multiple proteins in a star phylogeny. The structural divergence across time is modelled by letting the dihedral angles of the backbones evolve according to a diffusion over the flat square torus.
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Jun 20, 2023 - Julia
Implementation of Needleman-Wunsch's algorithm for sequences alignment using BLOSUM62 matrix
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Apr 15, 2023 - Python
Application of two different algorithms for sequence alignment
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Dec 10, 2017 - C
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