COEDL Summer School 2019 - Language Phylogenies Tutorial
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Updated
Nov 28, 2018
COEDL Summer School 2019 - Language Phylogenies Tutorial
a tool for automatic construction of molecular data matrix for phylogenetic inference based on GenBank records
An R package to prepare data for phylogenetic analysis
GRAPPA: Genome Rearrangements Analysis under Parsimony and other Phylogenetic Algorithms
Morphy releases are archived here. This project serves as the root folder for all of the source projects in Morphy.
Code of the article that describes the molecular epidemiology analyses of OsHV-1 virus by whole genome sequencing approaches in French shellfish growing areas.
Script for removing or counting invariant sites for the RAxML ascertainment bias corrections
Lab module and lectures for identifying phylogenetic history of SARS variants using R
Phylogenetic Inference and Data Visualization for Sequence-Based Typing Methods
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
Tool for estimating the Felsenstein bootstrap support of phylogenetic trees
Genomic Epidemiology of SARS-CoV-2 in Pakistan
A Modular and Web-Based Tool for Phylogenetic Analysis
A Framework for Large Scale Phylogenetic Analysis
Repositório para apresentação de código desenvolvido pelo grupo 3 para a UC Algoritmos para Análise Sequências Biológicas do Mestrado em Bioinformática, ano lectivo 23-24.
A python pipeline that brings together tools for generation of consensus sequence, multiple sequence alignment, and phylogenetic analysis.
Repository for accumulating the complete pipeline of phylogenetic studies
A comparative annotation toolkit (CAT) pipeline for 304 fly genomes.
Github repository for "Sequential trait evolution did not drive deep-time diversification in sharks" article, published in Evolution
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