FLiCK - Format LeveragIng Compression frameworK
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Updated
Dec 22, 2017 - Java
FLiCK - Format LeveragIng Compression frameworK
Used for counting the number of all four nucleotides and finding the percentage number of each of them
This is a web application to count the nucleotides composition in a DNA sequence sample.
No longer actively developed...See README
Determine the thermodynamic properties for nucleotide conversions
Small programs to parse and analyze sequence files. Misc programs
A website made for a year-long school project on how store data in DNA, using a nucleotides as our code. The website was made using the Flask framework to incoporate some python programs
Extracts all of the possible genes from a string of DNA
📊🧬 Dinucleotide frequencies in the genome of model organisms 🐁🦠
A python script that implements an efficient algorithm for the Chimeric Alignment problem. A virus infects a bacterium and modifies a replication process in the bacterium by adding for each A an A sequence of length 1-5, for each C a C sequence of length 1-10, for each G a G sequence of length >= 1 and for each T a T sequence of length >= 1.
A Python script that implements a two player strategic game with two chromosomes having length n and m of nucleotides respectively. In each Round of the game a player can destroy one of the chromosomes and split the other into two non-empty parts. The player who deletes the last nucleotide wins.
translation of nucleotide sequence to protein sequence in matlab
blast docker image and cyverse integration
Implementation of space-saving three DNA sequences alignment
Convert output from Samtools pileup into a matrix.
🧬 Python utilities for working with nucleotide sequence strings.
A tool to find amino acids associated with RNA and DNA nucleotide chains.
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