How to set up and run the Miniasm assembler.
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Updated
Sep 9, 2022
How to set up and run the Miniasm assembler.
NanoSwe: Analysing nanopore (PromethION) data of Swedish genomes
#NoJobTooSmall Contract / ForHire job shop for laboratory tool building / developmental work in the nanoscale realm as well as nanofabrication mfg engineering
Nanopore based RNA-Seq pipeline for viral samples
Rapid comprehensive adaptive nanopore-sequencing of CNS tumours set-up and analysis pipeline
A fully-equipped, fast, memory-efficient pre-processor for ONT transcriptomic data
Pipeline with GUI for nanopore-sequencing.
A tool to filter short artificial deletion variations by Oxford Nanopore Technologies R9 and R10 flow cells and chemistries.
This repository is the current repository for our Jones et al. 2024 manuscript titled Long-read RNA sequencing identifies region- and sex-specific C57BL/6J mouse brain mRNA isoform expression and usage.
My Key Story presentation for Auckland Research Bazaar 2020
Demo data repo for workflow or function test
How to channel sequencing reads from multiple subdirectories into nextflow pipeline
Convert output from Samtools pileup into a matrix.
React webapp to submit and retrieve jobs from Deciphon – a protein prediction tool for nanopore reads
Our presentation on 'real-time' genomics for ESR Data Science Week 2020.
Ribosomal operon sequences database for mapping and taxonomy assignment
A long read nanopore genome assembly and error correction pipeline
Accompanying information to a scientific publication on the assembly of bacterial genomes using Illumina and nanopore sequencing data using Unicylcer.
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