The TemplateFlow Archive - A DataLad super-dataset

Code examples of the free course in Youtube of brain MRI preprocessing techniques in python

3D Visualization of Brain MRI

The following is a new architecture for robust segmentation. It may perform better than a U-Net :) for binary segmentation. I will update the code when I have some spare time within the next month. However you can simply read this one and will soon notice the pattern after a bit

A Matlab toolbox for examining the quality of structural (SNR) and functional (tSNR, SFNR) MRI

mrQA: tools for quality assurance in medical imaging datasets, including protocol compliance

Non-parametric T2 relaxometry methods for myelin water quantification

FaBiAN is the first Fetal Brain magnetic resonance Acquisition Numerical phantom that simulates realistic T2-weighted magnetic resonance images of the developing fetal brain throughout gestation. It is open source and supports reproducibility studies to improve fetal brain diagnosis.

Forked to 'github.com/uwmri/QVT'

Generation missing MRI using GANs - master thesis from Politechnic of Milan

Codebase for Conditioned Diffusion Models for Unsupervised Anomaly Detection

Javascript engine for 3D brain model (used by RAVE project)

Computational Anatomy Toolbox for SPM12

A workflow to allow Freesurfer recon-all to run on brain image with gliomas

Federated learning with homomorphic encryption enables multiple parties to securely co-train artificial intelligence models in pathology and radiology, reaching state-of-the-art performance with privacy guarantees.

Transformer-based Models for Unsupervised Anomaly Segmentation in Brain MR Images

This is the repository that accompanies the manuscript "Deep Learning of MRI Contrast Enhancement for Mapping Cerebral Blood Volume from Single-Modal Non-Contrast Scans of Aging and Alzheimer's Disease Brains" accepted for publication in Frontiers in Aging Neuroscience, section Neurocognitive Aging and Behavior (July-18-2022).

This is a repository hosting all models detailed in the article Brain tumour segmentation with incomplete imaging data.

A toolbox for NIfTI and Analyze medical image visualization, editing, and 3D rendering